All R packages

Found 35023 packages. Showing results 3151 to 3200.

Cluster and Tree Conversion.
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data.
Generate customized protein database from NGS data, with a focus on RNA-Seq data, for proteomics search.
Cancer Variant Explorer
Using Mass Cytometry for Differential Abundance Analyses
cytofkit: an integrated mass cytometry data analysis pipeline
GatingML interface for openCyto
Accurate, high-resolution sample inference from amplicon sequencing data
dagLogo
Efficient design and analysis of factorial two-colour microarray data
Data Mining for RNA-seq data: normalization, feature selection and classification
Tools for the Differential Analysis of Proteins Abundance with R
Denoising Algorithm based on Relevance network Topology
Distributed Annotation System in R
Retrieval from the DAVID bioinformatics data resource into R
Differential Binding of Transcription Factor with ChIP-seq
Distance-correlation based Gene Set Analysis for longitudinal gene expression profiles
DChIPRep - Analysis of chromatin modification ChIP-Seq data with replication
The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR)
Distinguish direct and indirect interactions with Graphical Modelling
debrowser: Interactive Differential Expresion Analysis Browser
Tools for curating, analyzing, and manipulating biological sequences
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data
Differential Expression via Distance Summary for Microarray Data
DeepBlueR
Detection of subclonal SNVs in deep sequencing data.
Differential gene expression data formats converter
Two-sample tests on a graph
Report of DEG analysis
Identify Differentially Expressed Genes from RNA-seq data
Delayed operations on array-like objects
deltaGseg
DeMAND
Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach
derfinder helper package
Differential gene expression analysis based on the negative binomial distribution
Differential gene expression analysis based on the negative binomial distribution
Creates diffusion maps
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments
Inference of differential exon usage in RNA-Seq
DEXUS - Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions or without Replicates
Gene Selection
Differential Binding Analysis of ChIP-Seq Peak Data
Performs differential gene expression Analysis
Differential Analyis of Hi-C Data
DiffLogo: A comparative visualisation of sequence motifs
Identifying differential DNA loops from chromatin topology data
Inference of Genetic Variants Driving Cellular Phenotypes
A dynamic visualization tool of multi-level data
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data

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