All R packages

Found 39507 packages. Showing results 3301 to 3350.

Bioconductor-mirror/arrayQuality
Assessing array quality on spotted arrays
Bioconductor-mirror/arrayQualityMetrics
Quality metrics report for microarray data sets
Bioconductor-mirror/ArrayTools
geneChip Analysis Package
Bioconductor-mirror/ArrayTV
Implementation of wave correction for arrays
Bioconductor-mirror/ARRmNormalization
Adaptive Robust Regression normalization for Illumina methylation data
Bioconductor-mirror/ASAFE
Ancestry Specific Allele Frequency Estimation
Bioconductor-mirror/ASEB
Predict Acetylated Lysine Sites
Bioconductor-mirror/ASGSCA
Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models
Bioconductor-mirror/asmn
All sample mean normalization.
Bioconductor-mirror/ASpli
Analysis of alternative splicing using RNA-Seq
Bioconductor-mirror/ASSET
An R package for subset-based association analysis of heterogeneous traits and subtypes
Bioconductor-mirror/ASSIGN
Adaptive Signature Selection and InteGratioN (ASSIGN)
Bioconductor-mirror/ATACseqQC
ATAC-seq Quality Control
Bioconductor-mirror/AtlasRDF
Gene Expression Atlas query and gene set enrichment package.
Bioconductor-mirror/attract
Methods to Find the Gene Expression Modules that Represent the Drivers of Kauffman's Attractor Landscape
Bioconductor-mirror/BaalChIP
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes
Bioconductor-mirror/BAC
Bayesian Analysis of Chip-chip experiment
Bioconductor-mirror/bacon
Controlling bias and inflation in association studies using the empirical null distribution
Bioconductor-mirror/BADER
Bayesian Analysis of Differential Expression in RNA Sequencing Data
Bioconductor-mirror/BadRegionFinder
BadRegionFinder: an R/Bioconductor package for identifying regions with bad coverage
Bioconductor-mirror/BAGS
A Bayesian Approach for Geneset Selection
Bioconductor-mirror/ballgown
Flexible, isoform-level differential expression analysis
Bioconductor-mirror/bamsignals
Extract read count signals from bam files
Bioconductor-mirror/banocc
Bayesian ANalysis Of Compositional Covariance
Bioconductor-mirror/basecallQC
Working with Illumina Basecalling and Demultiplexing input and output files
Bioconductor-mirror/BaseSpaceR
R SDK for BaseSpace RESTful API
Bioconductor-mirror/Basic4Cseq
Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data
Bioconductor-mirror/BasicSTARRseq
Basic peak calling on STARR-seq data
Bioconductor-mirror/BatchQC
Batch Effects Quality Control Software
Bioconductor-mirror/BayesKnockdown
BayesKnockdown: Posterior Probabilities for Edges from Knockdown Data
Bioconductor-mirror/BayesPeak
Bayesian Analysis of ChIP-seq Data
Bioconductor-mirror/baySeq
Empirical Bayesian analysis of patterns of differential expression in count data
Bioconductor-mirror/BBCAnalyzer
BBCAnalyzer: an R/Bioconductor package for visualizing base counts
Bioconductor-mirror/BCRANK
Predicting binding site consensus from ranked DNA sequences
Bioconductor-mirror/beadarray
Quality assessment and low-level analysis for Illumina BeadArray data
Bioconductor-mirror/beadarraySNP
Normalization and reporting of Illumina SNP bead arrays
Bioconductor-mirror/BeadDataPackR
Compression of Illumina BeadArray data
Bioconductor-mirror/BEAT
BEAT - BS-Seq Epimutation Analysis Toolkit
Bioconductor-mirror/BEclear
Correct for batch effects in DNA methylation data
Bioconductor-mirror/betr
Identify differentially expressed genes in microarray time-course data
Bioconductor-mirror/bgafun
BGAfun A method to identify specifity determining residues in protein families
Bioconductor-mirror/BgeeDB
Annotation and gene expression data retrieval from Bgee database
Bioconductor-mirror/BGmix
Bayesian models for differential gene expression
Bioconductor-mirror/bgx
Bayesian Gene eXpression
Bioconductor-mirror/BHC
Bayesian Hierarchical Clustering
Bioconductor-mirror/BicARE
Biclustering Analysis and Results Exploration
Bioconductor-mirror/BiGGR
Constraint based modeling in R using metabolic reconstruction databases
Bioconductor-mirror/bigmelon
Illumina methylation array analysis for large experiments
Bioconductor-mirror/bigmemoryExtras
An extension of the bigmemory package with added safety, convenience, and a factor class
Bioconductor-mirror/bioassayR
Cross-target analysis of small molecule bioactivity