All R packages

Found 39625 packages. Showing results 3601 to 3650.

Bioconductor-mirror/dexus
DEXUS - Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions or without Replicates
Bioconductor-mirror/DFP
Gene Selection
Bioconductor-mirror/DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Bioconductor-mirror/diffGeneAnalysis
Performs differential gene expression Analysis
Bioconductor-mirror/diffHic
Differential Analyis of Hi-C Data
Bioconductor-mirror/DiffLogo
DiffLogo: A comparative visualisation of sequence motifs
Bioconductor-mirror/diffloop
Identifying differential DNA loops from chromatin topology data
Bioconductor-mirror/diggit
Inference of Genetic Variants Driving Cellular Phenotypes
Bioconductor-mirror/Director
A dynamic visualization tool of multi-level data
Bioconductor-mirror/DirichletMultinomial
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
Bioconductor-mirror/discordant
The Discordant Method: A Novel Approach for Differential Correlation
Bioconductor-mirror/dks
The double Kolmogorov-Smirnov package for evaluating multiple testing procedures.
Bioconductor-mirror/DMRcaller
Differentially Methylated Regions caller
Bioconductor-mirror/DMRcate
Methylation array and sequencing spatial analysis methods
Bioconductor-mirror/DMRforPairs
DMRforPairs: identifying Differentially Methylated Regions between unique samples using array based methylation profiles
Bioconductor-mirror/DMRScan
Detection of Differentially Methylated Regions
Bioconductor-mirror/DNABarcodes
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments
Bioconductor-mirror/DNAcopy
DNA copy number data analysis
Bioconductor-mirror/DNAshapeR
High-throughput prediction of DNA shape features
Bioconductor-mirror/domainsignatures
Geneset enrichment based on InterPro domain signatures
Bioconductor-mirror/doppelgangR
Identify likely duplicate samples from genomic or meta-data
Bioconductor-mirror/DOQTL
Genotyping and QTL Mapping in DO Mice
Bioconductor-mirror/DOSE
Disease Ontology Semantic and Enrichment analysis
Bioconductor-mirror/DRIMSeq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
Bioconductor-mirror/DriverNet
Drivernet: uncovering somatic driver mutations modulating transcriptional networks in cancer
Bioconductor-mirror/DrugVsDisease
Comparison of disease and drug profiles using Gene set Enrichment Analysis
Bioconductor-mirror/dSimer
Integration of Disease Similarity Methods
Bioconductor-mirror/DSS
Dispersion shrinakge for sequencing data.
Bioconductor-mirror/DTA
Dynamic Transcriptome Analysis
Bioconductor-mirror/dualKS
Dual KS Discriminant Analysis and Classification
Bioconductor-mirror/DupChecker
a package for checking high-throughput genomic data redundancy in meta-analysis
Bioconductor-mirror/dupRadar
Assessment of duplication rates in RNA-Seq datasets
Bioconductor-mirror/dyebias
The GASSCO method for correcting for slide-dependent gene-specific dye bias
Bioconductor-mirror/DynDoc
Dynamic document tools
Bioconductor-mirror/EasyqpcR
EasyqpcR for low-throughput real-time quantitative PCR data analysis
Bioconductor-mirror/easyRNASeq
Count summarization and normalization for RNA-Seq data
Bioconductor-mirror/EBarrays
Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification
Bioconductor-mirror/EBcoexpress
EBcoexpress for Differential Co-Expression Analysis
Bioconductor-mirror/EBImage
Image processing and analysis toolbox for R
Bioconductor-mirror/EBSEA
Exon Based Strategy for Expression Analysis of genes
Bioconductor-mirror/EBSeq
An R package for gene and isoform differential expression analysis of RNA-seq data
Bioconductor-mirror/EBSeqHMM
Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments
Bioconductor-mirror/ecolitk
Meta-data and tools for E. coli
Bioconductor-mirror/EDASeq
Exploratory Data Analysis and Normalization for RNA-Seq
Bioconductor-mirror/EDDA
Experimental Design in Differential Abundance analysis
Bioconductor-mirror/edge
Extraction of Differential Gene Expression
Bioconductor-mirror/edgeR
Empirical Analysis of Digital Gene Expression Data in R
Bioconductor-mirror/eegc
Engineering Evaluation by Gene Categorization (eegc)
Bioconductor-mirror/EGAD
Extending guilt by association by degree
Bioconductor-mirror/EGSEA
Ensemble of Gene Set Enrichment Analyses