All R packages

Found 34903 packages. Showing results 4051 to 4100.

Statistical Analysis of Metabolite Profile
Stepwise normalization functions for cDNA microarrays
Stepwise Classification of Cancer Samples using High-dimensional Data Sets
STRINGdb (Search Tool for the Retrieval of Interacting proteins database)
Assign Properties to TNBC Patients
Subsampling of high-throughput sequencing count data
SummarizedExperiment container
supraHex: a supra-hexagonal map for analysing tabular omics data
Performance Assessment and Comparison for Survival Analysis
Tools for visualizing genomics data
SVAPLSseq-An R package to adjust for the hidden factors of variability in differential gene expression studies based on RNAseq data
SVM2CRM: support vector machine for cis-regulatory elements detections
Transform and Filter SWATH Data for Statistical Packages
SWATH extended library generation and satistical data analysis
Science-wise false discovery rate and proportion of true null hypotheses estimation
Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm
Switch-like differential expression across single-cell trajectories
Label-free data analysis pipeline for optimal identification and quantitation
Calculate and Visualize Synergy Scores for Drug Combinations
Hits Selection for Synthetic Lethal RNAi Screen Data
systemPipeR: NGS workflow and report generation environment
TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information
A package for the analysis of GC-MS metabolite profiling data
TARgeted SEQuencing Experiment Quality Control
TCGAbiolinks: An R/Bioconductor package for integrative analysis with TCGA data
"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"
Time course sequencing data analysis
Network reverse engineering from time course data.
Ternary Network Estimation
Software Package for Transcription Factor Binding Site (TFBS) Analysis
Transcription factor Inference through Gaussian process Reconstruction of Expression
Statistical Analysis for Developmental Microarray Time Course Data
Timer Quantification
Transcriptome instability analysis
Subclonal copy number and LOH prediction from whole genome sequencing of tumours
R based tk widgets
Import, process and analysis of Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) imaging data
Package for Topology-based Pathway Analysis of RNASeq data
Enrichment Analysis for Gene Ontology
Analyze thermal proteome profiling (TPP) experiments
Build IGV tracks and HTML reports
An Integrative Tool for ChIP- And RNA-Seq Based Primary Transcripts Detection and Quantification
Comparison between multiple levels of gene expression
Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets
GWAS trait-associated SNP enrichment analyses in genomic intervals
Base Classes and Functions for Phylogenetic Tree Input and Output
Triform finds enriched regions (peaks) in transcription factor ChIP-sequencing data
Transcriptional Regulatory Inference from Genetics of Gene ExpRession
Search and visualize intramolecular triplex-forming sequences in DNA
TRONCO, an R package for TRanslational ONCOlogy

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