Return type of analysis

Share:

Description

Return type of analysis from data set created by AnaquinData

Usage

1
2
3
4
analysis(object, ...)

## S4 method for signature 'AnaquinData'
analysis(object)

Arguments

...

Not used

object

S4 object created by AnaquinData

Details

This function takes an AnaquinData object and return the type of analysis.

Value

Type of analysis, eg: PlotLinear

Examples

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
# Sequin names
names <- row.names(UserGuideData_5.4.6.3)

#Input concentration
input <- log2(UserGuideData_5.4.6.3$InputConcent)

# Measured FPKM
measured <- log2(UserGuideData_5.4.6.3[,2:4])

anaquin <- AnaquinData(analysis='PlotLinear',
                           seqs=names,
                          input=input,
                       measured=measured)
analysis(anaquin)