# Create a Table of Inbreeding Coefficient Estimates from PC-Relate Output

### Description

`pcrelateReadInbreed`

is used to create a table of inbreeding coefficient estimates from the output of `pcrelate`

.

### Usage

1 | ```
pcrelateReadInbreed(pcrelObj, scan.include = NULL, f.thresh = NULL)
``` |

### Arguments

`pcrelObj` |
The object containing the output from |

`scan.include` |
A vector of IDs for samples to be included in the table. The default is NULL, which includes all samples in |

`f.thresh` |
Specifies a minimum value of the estimated inbreeding coefficient to include in the table; i.e. only individuals with an estimated inbreeding coefficient greater than |

### Details

This function provides an easy way to make a table of estimated inbreeding coefficients.

### Author(s)

Matthew P. Conomos

### References

Conomos M.P., Reiner A.P., Weir B.S., & Thornton T.A. (2016). Model-free Estimation of Recent Genetic Relatedness. American Journal of Human Genetics, 98(1), 127-148.

### See Also

`pcrelate`

for the function that performs PC-Relate.
`pcrelateReadKinship`

for the function that creates a table of pairwise kinship coefficient and IBD sharing probabilities from the same PC-Relate output file.
`pcrelateMakeGRM`

for the function that creates a genetic relationship matrix (GRM) of pairwise kinship coefficient estimates from the same PC-Relate output file.