available.species: Returns a data.frame that lists the available species strings...

Description Usage Value Author(s) Examples

View source: R/available.species.R

Description

NCBI maintains a collection of unique taxonomy Ids and pairs these with associated genus and species designations. This function returns the set of pre-processed values that we use to check that something is a valid Taxonomy ID (or species name)

Usage

1

Value

A data frame with 1 row per species designation and two columns. The 1st column is the taxonomy Id. The second columns is the species name.

Author(s)

Marc Carlson

Examples

1
2
3
4
5
  ## get the data
  spec <- available.species()
  tail(spec)
  ## which can then be searched etc.
  spec[grepl('yoelii',spec$species),]

GenomeInfoDb documentation built on June 10, 2017, 2:01 a.m.

Search within the GenomeInfoDb package
Search all R packages, documentation and source code