Get all probes related to gene

Share:

Description

Given a MethylationResults and a gene name returns the results of the analysis of all the probes of the gene.

Usage

1
getGeneVals(object, gene)

Arguments

object

MethylationResults

gene

Character with the name of the gene

Value

List of data.frames with the results of the analysis of the probes belonging to the gene

Examples

1
2
3
4
5
if (require(minfiData)){
set <- prepareMethylationSet(getBeta(MsetEx)[1:10,], pheno = pData(MsetEx))
methyOneVar <- DAPipeline(set, variable_names = "sex", probe_method = "ls")
getGeneVals(methyOneVar, "TSPY4")
}

Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.