mutation_types: This function has been renamed. Use 'mut_type' instead.

Description Usage Arguments Value See Also Examples

View source: R/mut_type.R

Description

This function has been renamed. Use 'mut_type' instead.

Usage

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Arguments

vcf

A GRanges object.

Value

Character vector with base substitution types

See Also

read_vcfs_as_granges mut_type

Examples

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## See the 'read_vcfs_as_granges()' example for how we obtained the
## following data:
vcfs <- readRDS(system.file("states/read_vcfs_as_granges_output.rds",
                package="MutationalPatterns"))

mut_type(vcfs[[1]])

MutationalPatterns documentation built on Nov. 17, 2017, 11:10 a.m.