get_coremat: Create core OTU matrix containing number of OTUs detected at...

Description Usage Arguments Value

Description

Create core OTU matrix containing number of OTUs detected at varying detection and prevalence thresholds.

Usage

1

Arguments

pstat

PathoStat object

Value

Data frame containing number of OTUs at varying detection and prevalence thresholds, with rows corresponding to number of samples and columns corresponding to detection thresholds. An additional column called "prev"contains the sample threshold for each row.



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