pathostat: Build PathoStat-class object from its phyloseq component.

Description Usage Arguments Value Examples

Description

Build PathoStat-class object from its phyloseq component.

Usage

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pathostat(physeq1)

Arguments

physeq1

phyloseq object

Value

pstat The pathostat object generated from the given phyloseq object

Examples

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rich_dense_biom  = system.file("extdata", "rich_dense_otu_table.biom", 
    package="phyloseq")
phyob <- phyloseq::import_biom(rich_dense_biom)
pstat_biom <- pathostat(phyob)


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