Plot silhouette indexes of the cells

Description

A silhouette is a quantitative measure of the diagonality of the consensus matrix. An average silhouette width (shown at the bottom left of the silhouette plot) varies from 0 to 1, where 1 represents a perfectly block-diagonal consensus matrix and 0 represents a situation where there is no block-diagonal structure. The best clustering is achieved when the average silhouette width is close to 1.

Usage

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sc3_plot_silhouette.SCESet(object, k)

## S4 method for signature 'SCESet'
sc3_plot_silhouette(object, k)

Arguments

object

an object of 'SCESet' class

k

number of clusters

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