celdaProbabilityMap-celda_C-method: Probability map for a celda_C model

Description Usage Arguments Value See Also Examples

Description

Renders probability and relative expression heatmaps to visualize the relationship between cell populations and samples.

Usage

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## S4 method for signature 'celda_C'
celdaProbabilityMap(counts, celdaMod, level = c("sample"), ...)

Arguments

counts

Integer matrix. Rows represent features and columns represent cells. This matrix should be the same as the one used to generate 'celdaMod'.

celdaMod

Celda object of class 'celda_C'.

level

Character. 'sample' will display the absolute probabilities and relative normalized abundance of each cell population in each sample. Default 'sample'.

...

Additional parameters.

Value

A grob containing the specified plots

See Also

'celda_C()' for clustering cells

Examples

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celda documentation built on June 9, 2020, 2 a.m.