Plot the coefficient of variation between flowJo and flowCore population statistics for each population in a gating hierarchy.

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Description

This function plots the coefficient of variation calculated between the flowJo population statistics and the flowCore population statistics for each population in a gating hierarchy extracted from a flowJoWorkspace.

Usage

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## S4 method for signature 'GatingHierarchy'
plotPopCV(x, m = 2, n = 2, path = "auto", ...)

## S4 method for signature 'GatingSet'
plotPopCV(x, scales = list(x = list(rot = 90)),
  path = "auto", ...)

Arguments

x

A GatingHierarchy from or a GatingSet.

m

numeric The number of rows in the panel plot. Now deprecated, uses lattice.

n

numeric The number of columns in the panel plot. Now deprecated, uses lattice.

path

character see getNodes

scales

list see barchart

...

Additional arguments to the barplot methods.

Details

The CVs are plotted as barplots across panels on a grid of size m by n.

Value

Nothing is returned.

See Also

getPopStats

Examples

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  ## Not run: 
    #G is a GatingHierarchy
    plotPopCV(G,4,4);
  
## End(Not run)

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