phangorn-class: Class "phangorn" This class stores ancestral sequences...

Description Slots Author(s) See Also

Description

Class "phangorn" This class stores ancestral sequences inferred from 'phangorn'

Slots

fields

available attributes

phylo

phylo object

seq_type

one of "NT" and "AA"

tip_seq

sequences of tips

ancseq

ancenstral sequences

subs

sequence substitution

AA_subs

Amino acid sequence substitution

extraInfo

extra information

Author(s)

Guangchuang Yu http://guangchuangyu.github.io

See Also

paml_rst



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