read HYPHY output
read.hyphy(nwk, ancseq, tip.fasfile = NULL)
tree file in nwk format, one of hyphy output
ancestral sequence file in nexus format,
one of hyphy output
tip sequence file
A hyphy object
Guangchuang Yu http://ygc.name
nwk <- system.file("extdata/HYPHY", "labelledtree.tree", package="ggtree")
ancseq <- system.file("extdata/HYPHY", "ancseq.nex", package="ggtree")
Questions? Problems? Suggestions? Tweet to @rdrrHQian@mutexlabs.com.
Please suggest features or report bugs with the GitHub issue tracker.
All documentation is copyright its authors; we didn't write any of that.