Run a topological analysis on an expression dataset using DEGraph package.
This function is deprecated and will be removed in a future release.
You can use
Ignore pathways with more than
The expression data and the pathway have to be annotated in the same set of identifiers.
A list with two elements:
results: a list with one entry for each successfully analyzed pathway;
errors: a vector containing the error messages of failed analyses.
L. Jacob, P. Neuvial, and S. Dudoit. Gains in power from structured two-sample tests of means on graphs. Technical Report arXiv:q-bio/1009.5173v1, arXiv, 2010.
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