NEWS.md

In methylGSA: Gene Set Analysis Using the Outcome of Differential Methylation

methylGSA 1.5.9

• Bug fixes on Shiny app
• Updated the definition of "promoter" on Shiny app

methylGSA 1.5.5

• In methylRRA(ORA), the overlapping between significant genes and genes in the gene set can be printed out

methylGSA 1.5.2

• Updated the definition of "promoter"

methylGSA 1.5.1

• Minor updates on package vignette

methylGSA 1.3.5

• Using IlluminaHumanMethylationEPICanno.ilm10b4.hg19

methylGSA 1.3.2

• Shiny app is available within the package

methylGSA 1.3.1

• Bug fixes in methylgometh

methylGSA 1.1.5

• Parallel option is supported

methylGSA 1.1.1

• Fixed typos in vignettes
• Included citation

methylGSA 0.99.16

• Minor changes in package vignettes

methylGSA 0.99.15

• Bug fix
• Included "top" and "sig.cut" option for methylRRA

methylGSA 0.99.14

• Included gene sets description
• Included visualization
• Included option for analyzing promoter/body only

methylGSA 0.99.10

• Support user-supplied mapping between CpGs and Genes

methylGSA 0.99.7

• Development version
• Changed package name to methylGSA

methylGSA documentation built on Nov. 8, 2020, 8:29 p.m.