R/utils.R

In scPipe: pipeline for single cell RNA-seq data analysis

#' Get ERCC annotation table
#'
#' Helper function to retrieve ERCC annotation as a dataframe in SAF format
#'
#' @return data.frame containing ERCC annotation
#'
#' @examples
#' \dontrun{
#' ercc_anno <- get_ercc_anno()
#' }
#'
#' @export
#'

get_ercc_anno <- function() {
    anno_import(system.file("extdata", "ERCC92_anno.gff3", package = "scPipe"))
}