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R/Likelihood_thetas.R
In BEDASSLE: Quantifies Effects of Geo/Eco Distance on Genetic Differentiation
Defines functions
Likelihood_thetas
Documented in
Likelihood_thetas
Likelihood_thetas <-
function(thetas,covmat) {
cholcov <- chol(covmat)
invcholcov <- MASS::ginv(cholcov)
logsqrtdet <- sum(log(diag(cholcov)))
-(1/2)*(colSums((crossprod(invcholcov,thetas))^2))-logsqrtdet
}
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BEDASSLE documentation built on April 11, 2022, 1:07 a.m.
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Defines functions Likelihood_thetas
Documented in Likelihood_thetas
Likelihood_thetas <-
function(thetas,covmat) {
cholcov <- chol(covmat)
invcholcov <- MASS::ginv(cholcov)
logsqrtdet <- sum(log(diag(cholcov)))
-(1/2)*(colSums((crossprod(invcholcov,thetas))^2))-logsqrtdet
}
Try the BEDASSLE package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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