optQ: Optimize q for a single simulation

Description Usage Arguments Author(s)

View source: R/popdyn.R

Description

Optimize q for a single simulation

Usage

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optQ(
  logQ,
  depc,
  SSB0c,
  nareas,
  maxage,
  Ncurr,
  pyears,
  M_age,
  Asize_c,
  MatAge,
  WtAge,
  Vuln,
  Retc,
  Prec,
  movc,
  SRrelc,
  Effind,
  Spat_targc,
  hc,
  R0c,
  SSBpRc,
  aRc,
  bRc,
  maxF,
  MPA,
  plusgroup,
  VB0c,
  optVB
)

Arguments

logQ

log q

depc

Depletion value

SSB0c

Unfished spawning biomass

nareas

Number of areas

maxage

Maximum age

Ncurr

Current N-at-age

pyears

Number of years to project population dynamics

M_age

M-at-age

Asize_c

Numeric vector (length nareas) with size of each area

MatAge

Maturity-at-age

WtAge

Weight-at-age

Vuln

Vulnerability-at-age

Retc

Retention-at-age

Prec

Recruitment error by year

movc

movement matrix

SRrelc

SR parameter

Effind

Historical fishing effort

Spat_targc

Spatial targetting

hc

Steepness

R0c

Unfished recruitment by area

SSBpRc

Unfished spawning biomass per recruit by area

aRc

Ricker aR

bRc

Ricker bR

maxF

maximum F

MPA

A matrix of spatial closures by year

plusgroup

Integer. Default = 0 = no plus-group. Use 1 to include a plus-group

VB0c

Unfished vulnerable biomass

optVB

Logical. Optimize for vulnerable biomass?

Author(s)

A. Hordyk


DLMtool documentation built on March 13, 2020, 2:52 a.m.