Nothing
plot.Daim.vector <- function(x, color="blue", type="l", bty="n",
xlab="False positive rate",ylab="True positive rate", main="ROC curve", ...)
{
best.cut <- which.max((1-x$FPR)+x$TPR-1)
plot(x$FPR, x$TPR, xlab=xlab, ylab=ylab, main=main, col=color, type=type, ...)
points(x$FPR[best.cut], x$TPR[best.cut], col=1, pch=19)
grid()
lines(c(0,1),c(0,1),col="black")
legend("bottomright",legend=
c(paste("best cut-off:",formatC(x$cutoff[best.cut],digits=max(3, getOption("digits") - 3))),
paste("FPR:",formatC(x$FPR[best.cut],digits=max(3, getOption("digits") - 3))),
paste("TPR:",formatC(x$TPR[best.cut],digits=max(3, getOption("digits") - 3))),
paste("AUC:",formatC(auc(1-x$FPR,x$TPR),digits=max(3, getOption("digits") - 3)))),inset=0.01,...)
}
plot.Daim.list <- function(x, color=rgb(1,0,0,alpha=0.5),
lty=1, lwd=1, pch=19,
xlab="False positive rate",ylab="True positive rate",
main="ROC curves", legend=TRUE, ...)
{
plot(c(0,1),c(0,1), type="n",xlim=c(0,1), ylim=c(0,1), xlab=xlab, ylab=ylab, main=main)
grid()
lines(c(0,1),c(0,1),col="black")
tmp.col <- color
tmp.lty <- lty
tmp.lwd <- lwd
tmp.pch <- pch
for(i in 1:length(x)){
if(length(color) > 1 && length(color) >= i)
tmp.col <- color[i]
if(length(lty) > 1 && length(lty) >= i)
tmp.lty <- lty[i]
if(length(lwd) > 1 && length(lwd) >= i)
tmp.lwd <- lwd[i]
if(length(pch) > 1 && length(pch) >= i)
tmp.pch <- pch[i]
best.cut <- which.max((1-x[[i]]$FPR)+x[[i]]$TPR-1)
lines(x[[i]]$FPR, x[[i]]$TPR, col=tmp.col, lty=tmp.lty, lwd=tmp.lwd, ...)
points(x[[i]]$FPR[best.cut], x[[i]]$TPR[best.cut], col=tmp.col, pch=tmp.pch, ...)
}
if(legend && length(x) < 11){
Nvar <- names(x)
legend("bottomright", paste("best cut-off ",Nvar,sep=""), col=color,
lty=lty,pch=pch, merge=TRUE, inset=0.01, bg="white", ...)
}
}
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