Nothing
################################
#### Cosines to Azimuth/Plunge
#### Eli Amson 10/2017
#### eli.amson1988@gmail.com
#### References: Amson E, Arnold P, Van Heteren AH, Cannoville A, Nyakatura JA. Trabecular architecture in the forelimb epiphyses of extant xenarthrans (Mammalia). Frontiers in Zoology.
################################
cosap <- function(x, y, z) {
try(if (length(x)!=length(y)|length(x)!=length(z)|length(z)!=length(y)) stop("Dimensions of x, y, and z do not match"))
A <- NA
P <- NA
for (i in 1:length(x)){
### A[i] (azimuth, theta) ####
if (z[i] <= 0) {
if (y[i] < 0) {
A[i] <- 180 - atan(x[i]/y[i]) * 180 / pi #if z[i] = 0, A[i] is mod 180 degrees
} else {
if ( y[i] > 0 ) {
A[i] <- 360 * (x[i] > 0) - atan(x[i]/y[i]) * 180 / pi
} else {
if (z[i] == 0) {
A[i] <- 90 + 180 * (x[i] < 0) # same as 270 in this case
} else {
A[i] <- 90 + 180 * (x[i] > 0)
}
}
}
} else {
if (-y[i] < 0) {
A[i] <- 180 - atan(x[i]/y[i]) * 180 / pi
} else {
if ( -y[i] > 0 ){
A[i] <- 360 * (-x[i] > 0) - atan(x[i]/y[i]) * 180 / pi
} else {
if ( z[i] == 0) {
A[i] <- 90 + 180 * (x[i] < 0) # same as 270 in this case
} else {
A[i] <- 90 + 180 * (x[i] <= 0)
}
}
}
}
##### P[i] (plunge, delta) ####
P[i] <- asin(-z[i]) * 180 / pi
if (z[i] > 0) P[i] <- - P[i]
}
##### Append results ####
list(A = A, P = P)
}
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