Description Usage Arguments Details Value Author(s) References See Also Examples

Calculates the species richness at a specified population size, taking an object of class *DiveMaster* as an input.

1 | ```
PopDiversity(dm, popsize, TopX=NULL)
``` |

`dm` |
list of objects of class |

`popsize` |
positive real number. Population size. |

`TopX` |
a positive integer, less than the number of models contained in |

*CombDM* combines multiple objects of class *DiveMaster*. Function used if *DivE* estimation has been split into multiple, separate calls to `DiveMaster`

.

A list of objects:

`estimate` |
point estimate of diversity (species richness) |

`upper_estimate ` |
estimate upper bound |

`lower_estimate ` |
estimate lower bound |

Daniel J. Laydon, Aaron Sim, Charles R.M. Bangham, Becca Asquith

Laydon, D. J., Melamed, A., Sim, A., Gillet, N. A., Sim, K., Darko, S., Kroll, S., Douek, D. C., Price, D., Bangham, C. R. M., Asquith, B., Quantification of HTLV-1 clonality and TCR diversity, PLOS Comput. Biol. 2014

1 | ```
# See DiveMaster documentation for examples.
``` |

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