maxnet.functions: Functions for compatability with maxnet package

Description Usage Arguments Details Value Author(s) References

Description

These functions are used internally for compatability with the maxnet package (Phillips et al. 2017, Phillips 2017).

Usage

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  maxentJARversion ()
  modelTune.maxentJar (pres, bg, env, nk, group.data, 
                        args.i, userArgs, rasterPreds, clamp, categoricals)
  modelTune.maxnet (pres, bg, env, nk, group.data, args.i, rasterPreds, clamp)
  maxnet.predictRaster (mod, env, type, clamp)

Arguments

pres

Occurrence points.

bg

Background points.

env

Environmental predictor variables.

nk

Number of k-fold partitions.

group.data

Input data grouped for k-fold evaluations (output of the get.evaluation.bins functions).

args.i

Internal arguments.

userArgs

User arguments.

rasterPreds

Raster(s) of model predictions.

clamp

Logical.

categoricals

Vector indicating which (if any) of the input environmental layers are categorical.

mod

maxnet model object.

type

see maxnet package documentation.

Details

These functions are used internally for compatability with the maxnet package.

Value

Depends on which function is used.

Author(s)

Robert Muscarella <bob.muscarella@gmail.com> and Jamie M. Kass <jkass@gc.cuny.edu>

References

Phillips, S. J. 2017. maxnet package for R. Available online at: https://CRAN.R-project.org/package=maxnet.

Phillips, S. J., Anderson, R. P., Dudík, M., Schapire, R. E. and Blair, M. E. 2017. Opening the black box: an open-source release of Maxent. Ecography, 40: 887–893.


ENMeval documentation built on Jan. 13, 2021, 8:08 p.m.