Nothing
get_nw_clip_block_params = function(chunksize, dynrange, monc, rmc.noise=c(), sf, dformat,
rmc.dynamic_range) {
blocksize = round(14512 * (sf/50) * chunksize)
if (monc == MONITOR$GENEA) blocksize = round(21467 * (sf/80) * chunksize)
if (monc == MONITOR$ACTIGRAPH && dformat == FORMAT$CSV) blocksize = round(blocksize)#round(blocksize/5)
if (monc == MONITOR$ACTIGRAPH && dformat == FORMAT$GT3X) blocksize = (24 * 3600) * chunksize
if (monc == MONITOR$AXIVITY && dformat == FORMAT$CWA) {
if (utils::packageVersion("GGIRread") >= "0.3.1") {
# 24-hour block.
# CWA data blocks can have 40, 80 or 120 samples each; we'll take 80 as the average number.
blocksize = round(24 * 3600 * sf / 80 * chunksize)
} else {
blocksize = round(blocksize * 1.0043)
}
}
if (monc == MONITOR$AXIVITY && dformat == FORMAT$CSV) blocksize = round(blocksize)
if (monc == MONITOR$MOVISENS) blocksize = sf * 60 * 1440
if (monc == MONITOR$VERISENSE && dformat == FORMAT$CSV) blocksize = round(blocksize)
# Clipping threshold: estimate number of data points of clipping based on raw data at about 87 Hz
if (length(dynrange) > 0) {
clipthres = dynrange - 0.5
} else {
if (monc == MONITOR$GENEA) {
clipthres = 5.5
} else if (monc == MONITOR$GENEACTIV) {
clipthres = 7.5
} else if (monc == MONITOR$ACTIGRAPH) {
clipthres = 7.5 # hard coded assumption that dynamic range is 8g
} else if (monc == MONITOR$AXIVITY) {
clipthres = 7.5 # hard coded assumption that dynamic range is 8g
} else if (monc == MONITOR$MOVISENS) {
clipthres = 15.5 # hard coded assumption that dynamic range is 16g
} else if (monc == MONITOR$VERISENSE) {
clipthres = 7.5
} else if (monc == MONITOR$AD_HOC) {
clipthres = rmc.dynamic_range
}
}
# Nonwear threshold: non-wear criteria are monitor-specific
racriter = 0.15 # very likely irrelevant parameters, but leave in for consistency
if (monc == MONITOR$GENEA) {
sdcriter = 0.003
racriter = 0.05
} else if (monc == MONITOR$GENEACTIV) {
sdcriter = 0.013
} else if (monc == MONITOR$ACTIGRAPH) {
sdcriter = 0.013
} else if (monc == MONITOR$AXIVITY) {
sdcriter = 0.013
} else if (monc == MONITOR$MOVISENS) {
sdcriter = 0.013
} else if (monc == MONITOR$VERISENSE) {
sdcriter = 0.013
racriter = 0.20
} else if (monc == MONITOR$AD_HOC) {
if (length(rmc.noise) == 0) {
stop("Argument rmc.noise not specified, please specify expected noise level in g-units")
}
sdcriter = rmc.noise * 1.2
}
invisible(list(clipthres=clipthres, blocksize=blocksize, sdcriter=sdcriter, racriter=racriter))
}
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