Nothing
DESCRIPTION
and README
WORDLIST
1:n
expressions with seq_len(n)
inherits()
to check class inheritanceHiClimR2nc
: Updated documentation and examples\code{}
instead of \bold{}
for classesHiClimR2nc
: Fixed timeseries variable definitionREADME
: Link HiClimR
to CRAN
package pagefastCor
: Fixed row/col names of the correlation matrixfastCor
: Cleaned up zero-variance data checkmulti-variate
with multivariate
weightedVar
to weightMVC
DESCRIPTION
README
fastCor
: Removed zero-variance datafastCor
: Introduced optBLAS
fastCor
: Code cleanupREADME
and all URLsgeogMask
confusing country codes/namesgeogMask
filtering InDispute
areasx
should be created using as.vector(t(x0))
x0
is the n by m
original data matrixn = length(unique(lon))
and m = length(unique(lat))
coarseR
now returns the original row numbersREADME
corrections and updatesUndefined global functions
README
corrections and updatespch
and cex
)geogMask
supports ungridded data-180
to 180
(not 0
to 360
)rownames(TestCase$x)
for example!longitude,latitude
verbose
fixes and updatesREADME
corrections and updatesx
can now be a list of matrices (one matrix for each variable)length(x) = nvars
where nvars
is the number of variablesN
= number of objects (e.g., stations) to be clusteredM
may vary for each variablesnvars
(number of variables)length(meanThresh) = length(x) = nvars
length(varThresh) = length(x) = nvars
length(detrend) = length(x) = nvars
length(standardize) = length(x) = nvars
length(weightMVC) = length(x) = nvars
meanThresh
and varThresh
thresholdsdetrend
option, if requestedstandardize
option, if requestedweightMVC
option (default is 1
)fastCor
can now split the data matrix into nSplit
splitsupperTri
to fastCor
functionverbose
for printing processing informationdendrogram
for plotting dendrogram\dontrun{}
to skip time-consuming examplesk = 2
, for objective tree cuttingk = NULL
in validClimR
functionformatR
Error in -mask : invalid argument to unary operator
lonSkip
and latSkip
renamed to lonStep
and latStep
, respectivelystandardize = FALSE
data
component are now corrected geogMask
InDispute
is added to geogMask
function to optionally consider areas in dispute for geographic masking by countryfastCor
function that degrades its performance on 32-bit machines has been fixedBLAS
library, such as ATLAS
, OpenBLAS
, or the commercial Intel MKL
res
parameter) in geographic masking is removedLazyLoad
and LazyData
are enabled in the description fileworldMask
and TestCase
data are converted to lists to avoid conflicts of variable names (lon
, lat
, info
, and mask
) with lazy loadinghybrid
is added to enable a second clustering stepregional
linkage for reconstructing the upper part of the tree at a cutkH
(number of clusters to restart with using the regional
linkage method)kH = NULL
, the tree will be reconstructed for the upper part with the first merging cost larger than the mean merging cost for the entire treecoarseR
function is called inside the core HiClimR
functioncoords
component to the output tree for the longitude and latitude coordinatesvalidClimR
function does not require lon
and lat
argumentscoords
component)HiClimR
internally calls all other functionsregional
linkage methodk
should be specifiedHiClimR
to regional
linkage methodretData
.data
of the output treeHiCLimR
preprocessing options for further analysisregion
componentN
validCLimR
that enables users to exclude very small clusters from validation indices interCor
, intraCor
, diffCor
, and statSum
, by setting a value for the minimum cluster size (minSize > 1
)validClimR
in clustFlag
component, which takes a value of 1
for valid clusters or 0
for excluded clustersHiClimR
(currently, regional
linkage) method, noisy spatial elements (or stations) are isolated in very small-size clusters or individuals since they do not correlate well with any other elementscoarseR
function for coarsening spatial resolution of the input matrix x
HiClimR
package that modifies hclust
function in stats
libraryN
spatial elements (e.g., stations) are divided into k
regions, given that each element has observations (or timeseries) of length M
average
update formulae by incorporating the standard deviation of the mean of the merged region100%
.average
linkage clustering methodvalidClimR
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