MQDataReader-cash-readMappingFile: Reads a mapping table of full Raw file names to shortened...

Description Arguments Details Value

Description

The internal structure raw_file_mapping is created using this file. If the file is missing, nothing is done.

Arguments

filename

Source filename to read.

Details

The file must have two columns named: 'orig.Name' and 'new.Name' and use Tab as separator. I.e.

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# This file can be used to manually substitute Raw file names within the report.
# The ordering of Raw files in the report can be changed by re-arranging the rows.
orig.Name  new.Name
2011_05_30_ALH_OT_21_VIL_TMT_FR01   myfile A
2011_05_30_ALH_OT_22_VIL_TMT_FR02   another B

Value

Returns TRUE if file was read, FALSE if it does not exist.


PTXQC documentation built on Feb. 9, 2018, 6:08 a.m.