clonofreq: Plot clonal frequency barplot of the outout simulated data
In Platypus: Single-Cell Immune Repertoire and Gene Expression Analysis
View source: R/Echidna_other_functions.R
clonofreq R Documentation
Plot clonal frequency barplot of the outout simulated data
Description
Plot the top abundant clonal frequencies in a barplot with ggplot2
Usage
clonofreq(clonotypes, top.n, y.limit)
Arguments
clonotypes
The clonotypes dataframe, which is the second element in the simulation output list.
top.n
The top n abundant clones to be shown in the plot. If missing, all clones will be shown.
y.limit
The upper limit for y axis in the plot.
Value
top abundant clonal frequencies in a barplot with ggplot2
Platypus documentation built on Aug. 15, 2022, 9:08 a.m.
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View source: R/Echidna_other_functions.R
| clonofreq | R Documentation |
Plot clonal frequency barplot of the outout simulated data
Description
Plot the top abundant clonal frequencies in a barplot with ggplot2
Usage
clonofreq(clonotypes, top.n, y.limit)
Arguments
clonotypes |
The clonotypes dataframe, which is the second element in the simulation output list. |
top.n |
The top n abundant clones to be shown in the plot. If missing, all clones will be shown. |
y.limit |
The upper limit for y axis in the plot. |
Value
top abundant clonal frequencies in a barplot with ggplot2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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