clonofreq.isotype.data: Get information about the clonotype counts grouped by...
In Platypus: Single-Cell Immune Repertoire and Gene Expression Analysis
View source: R/Echidna_other_functions.R
clonofreq.isotype.data R Documentation
Get information about the clonotype counts grouped by isotype.
Description
Return
Usage
clonofreq.isotype.data(all.contig.annotations, top.n)
Arguments
all.contig.annotations
The output dataframe all_contig_annotation from function simulate.repertoire.
top.n
The top n abundant clones to be shown in the plot. If missing, all clones will be shown.
Value
dataframes containing the top n abundant clonotypes and their frequency and isotype information for further processing.
Platypus documentation built on Aug. 15, 2022, 9:08 a.m.
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View source: R/Echidna_other_functions.R
| clonofreq.isotype.data | R Documentation |
Get information about the clonotype counts grouped by isotype.
Description
Return
Usage
clonofreq.isotype.data(all.contig.annotations, top.n)
Arguments
all.contig.annotations |
The output dataframe all_contig_annotation from function simulate.repertoire. |
top.n |
The top n abundant clones to be shown in the plot. If missing, all clones will be shown. |
Value
dataframes containing the top n abundant clonotypes and their frequency and isotype information for further processing.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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