View source: R/Echidna_other_functions.R
cluster.id.igraph | R Documentation |
Get clone network igraphs colored by seurat cluster id.
cluster.id.igraph(meta.data, history, igraph.index, empty.node)
meta.data |
the meta.data dataframe from the Seurat object of the simulation. The object should be pre-processed and has cluster ids in the meta.data. |
history |
The dataframe 'history' from the simulation output. |
igraph.index |
The list 'igraph.index' from the simulation output. |
empty.node |
If TRUE, there will be empty node in igraph. if FALSE, the empty node will be deleted. |
a list of clone network igraphs colored by seurat cluster id
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