abn-internal | R Documentation |

These are functions for either internal use or error checking and are not meant to be called directly by the user.

buildScoreCache.bayes(data.df=NULL, data.dists=NULL, group.var=NULL, cor.vars=NULL, dag.banned=NULL, dag.retained=NULL, max.parents=NULL, which.nodes=NULL,defn.res=NULL,dry.run=FALSE, centre=TRUE, control = build.control(method = "bayes"), verbose = FALSE) buildScoreCache.mle(data.df = NULL, data.dists = NULL, max.parents = NULL, adj.vars = NULL, cor.vars = NULL, dag.banned = NULL, dag.retained = NULL, which.nodes = NULL, centre = TRUE, defn.res = NULL, dry.run = FALSE, verbose = FALSE, control = build.control(method = "mle")) fitAbn.mle(dag = NULL, data.df = NULL, data.dists = NULL, adj.vars = NULL, cor.vars = NULL, centre = TRUE, control = fit.control(method = "mle"), verbose = FALSE) fitAbn.bayes(dag=NULL, data.df=NULL, data.dists=NULL, group.var=NULL, cor.vars=NULL, centre=TRUE, compute.fixed=FALSE, control = fit.control(method = "bayes"), verbose=FALSE) calc.node.inla.glm(child.loc,dag.m.loc,data.df.loc,data.dists.loc, ntrials.loc,exposure.loc,compute.fixed.loc, mean.intercept.loc,prec.intercept.loc,mean.loc,prec.loc, loggam.shape.loc,loggam.inv.scale.loc,verbose.loc) calc.node.inla.glmm(child.loc,dag.m.loc,data.df.loc,data.dists.loc, ntrials.loc,exposure.loc,compute.fixed.loc, mean.intercept.loc,prec.intercept.loc,mean.loc,prec.loc, loggam.shape.loc,loggam.inv.scale.loc,verbose.loc)

`buildScoreCache.mle`

and `buildScoreCache.bayes`

are internal functions called by `buildScoreCache`

.

`fitAbn.mle`

and `fitAbn.bayes`

are internal functions called by `fitAbn`

.

`calc.node.inla.glm`

and `calc.node.inla.glmm`

are internal wrappers to INLA and are called from `fitAbn.bayes`

.

Fraser Iain Lewis, Gilles Kratzer

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