DiversityTest defines the signifance of diversity (D) differences at a
fixed diversity order (q).
1 2 3 4 5
arguments to pass to plotDiversityTest.
data.frame describing the significance test results with columns:
TEST: string listing the two groups tested.
DELTA_MEAN: mean of the D bootstrap delta
distribution for the test.
DELTA_SD: standard deviation of the D
bootstrap delta distribution for the test.
PVALUE: p-value for the test.
data.frame containing summary statistics for the diversity index bootstrap distributions, at the given value of q, with columns:
GROUP: the name of the group.
MEAN: mean of the D bootstrap distribution.
SD: standard deviation of the D bootstrap
character vector of groups retained in diversity calculation.
diversity order tested (q).
numeric vector indication the number of sequences sampled from each group.
number of bootstrap realizations.
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