Nothing
context("auk_ebd")
test_that("auk_ebd refrence ebd file", {
f <- system.file("extdata/ebd-sample.txt", package = "auk")
ebd <- auk_ebd(f)
expect_is(ebd, "auk_ebd")
expect_equal(ebd$file, normalizePath(f, winslash = "/"))
expect_equal(ebd$file, normalizePath(f, winslash = "/"))
expect_null(ebd$file_sampling)
expect_null(ebd$output)
expect_null(ebd$output_sampling)
expect_is(ebd$col_idx, "data.frame")
expect_is(ebd$col_idx$index, "integer")
expect_true(all(!is.na(ebd$col_idx$index)))
expect_null(ebd$col_idx_sampling)
})
test_that("auk_ebd refrence ebd and sampling files", {
f_ebd <- system.file("extdata/zerofill-ex_ebd.txt", package = "auk")
f_smpl <- system.file("extdata/zerofill-ex_sampling.txt", package = "auk")
ebd <- auk_ebd(f_ebd, file_sampling = f_smpl)
expect_is(ebd, "auk_ebd")
expect_equal(ebd$file, normalizePath(f_ebd, winslash = "/"))
expect_equal(ebd$file_sampling, normalizePath(f_smpl, winslash = "/"))
expect_null(ebd$output)
expect_null(ebd$output_sampling)
expect_is(ebd$col_idx, "data.frame")
expect_is(ebd$col_idx$index, "integer")
expect_true(all(!is.na(ebd$col_idx$index)))
expect_is(ebd$col_idx_sampling, "data.frame")
expect_is(ebd$col_idx_sampling$index, "integer")
expect_true(all(!is.na(ebd$col_idx_sampling$index)))
})
test_that("auk_ebd bad file references throws error", {
expect_error(auk_ebd("AAAAAA"))
expect_error(auk_ebd("AAAAAA", file_sampling = "BBBBBB"))
})
test_that("auk_ebd can't only have a sampling file", {
f_ebd <- system.file("extdata/zerofill-ex_ebd.txt", package = "auk")
f_smpl <- system.file("extdata/zerofill-ex_sampling.txt", package = "auk")
expect_error(auk_ebd(file_sampling = f_smpl))
})
test_that("auk_ebd incorrect separator throws error", {
f <- system.file("extdata/ebd-sample.txt", package = "auk")
expect_error(auk_ebd(f, sep = ","))
expect_error(auk_ebd(f, sep = " "))
expect_error(auk_ebd(f, sep = ",,,,,"))
})
test_that("auk_ebd prints method", {
f_ebd <- system.file("extdata/zerofill-ex_ebd.txt", package = "auk")
f_smpl <- system.file("extdata/zerofill-ex_sampling.txt", package = "auk")
ebd <- auk_ebd(f_ebd, file_sampling = f_smpl)
expect_output(print(ebd), normalizePath(f_ebd, winslash = "/"),
fixed = TRUE)
expect_output(print(ebd), normalizePath(f_smpl, winslash = "/"),
fixed = TRUE)
expect_output(print(ebd), "Filters not executed")
expect_output(print(ebd), "Complete checklists only: no")
# now fake apply filters
filters <- ebd %>%
auk_species(species = c("Canada Jay", "Blue Jay")) %>%
auk_country(country = c("US", "Canada")) %>%
auk_bbox(bbox = c(-100, 37, -80, 52)) %>%
auk_date(date = c("2012-01-01", "2012-12-31")) %>%
auk_last_edited(date = c("2010-01-01", "2017-12-31")) %>%
auk_time(start_time = c("06:00", "09:00")) %>%
auk_duration(duration = c(0, 60)) %>%
auk_complete()
filters$output <- "output.txt"
filters$output_sampling <- "output_sampling.txt"
expect_output(print(filters), "output.txt", fixed = TRUE)
expect_output(print(filters), "output_sampling.txt", fixed = TRUE)
expect_output(print(filters), "Countries: CA, US")
expect_output(print(filters), "Complete checklists only: yes")
})
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