DEGTest: A test of DEG detection

Description Usage Arguments Details Author(s) References Examples

Description

To test whether a gene differentially expressed in two experiments.

Usage

1
  deg.NGS(x,y, gene,iter=1001)

Arguments

x,y

Two data files

iter

maximum iteration to find the optimal fit.

gene

name of gene to be tested

Details

We fit a mixture model to take care the zero values using component-0.

Author(s)

B. Wang [email protected]

References

AS 254, ...

Examples

1
2
3
4
5
 # To be updated.
 x = rexp(100,1)
 x = c(rep(0,20),x)
 out = fit.NGS(x)
 plot(out)

bda documentation built on Jan. 5, 2018, 9:04 a.m.

Related to DEGTest in bda...