Class "ddpcr"

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Description

A class specifically designed to contain results from droplet digital PCR experiments. Data is represented as matrix, where each column describes different experiment. Type of data in all columns is specified in slot "type". Inherits from dpcr.

Details

For more in-depth explanation of digital PCR data structure, see dpcr.

Slots

threshold

numeric value giving the threshold. Partition with the value equal or bigger than threshold are considered positive.

Author(s)

Michal Burdukiewicz.

See Also

Ploting and managment: bind_dpcr, extract_dpcr, plot_vic_fam.

Simulation: sim_ddpcr.

Array digital PCR: adpcr.

Examples

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ddpcr_fluo <- sim_ddpcr(m = 10, n = 20, times = 5, fluo = list(0.1, 0))
plot(ddpcr_fluo)

ddpcr <- sim_ddpcr(m = 10, n = 20, times = 5)

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