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# compar: Comparison matrices ---------------------------------------------
#' @name compar
#' @title Create comparison matrix \code{A}
#'
#' @description For \code{k=0}, if \code{i==j}, $A[i,j]=abs(B[i,j])$ and
#' \code{A[i,j]=-abs(B[i,j])} otherwise. For \code{k=1}, \code{A} replaces each
#' diagonal element of \code{B} with its absolute value, and replaces each
#' off-diagonal with the negative of the largest absolute value off-diagonal
#' in the same row.
#'
#' @param B input matrix
#' @param k decides what matrix to return
#'
#' @return Comparison matrix
#'
#' @export
compar <- function(B, k = 0){
m <- nrow(B)
n <- ncol(B)
d <- abs(diag(B))
if(k == 0){
A <- -abs(B)
} else if(k == 1){
diag(B) <- 0
for(i in 1:nrow(A)){
row <- A[i,]
val <- -max(abs(row))
A[i,] <- val
}
}
diag(A) <- d
return(A)
}
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