Nothing
library(gpuR)
context("gpuMatrix algebra")
if(detectGPUs() >= 1){
current_context <- set_device_context("gpu")
}else{
current_context <- currentContext()
}
# set seed
set.seed(123)
ORDER <- 4
ORDER_PAD <- 129
# Base R objects
Aint <- matrix(sample(seq(10), ORDER^2, replace=TRUE), nrow=ORDER, ncol=ORDER)
Bint <- matrix(sample(seq(10), ORDER^2, replace=TRUE), nrow=ORDER, ncol=ORDER)
AintPad <- matrix(sample(seq(10), ORDER*ORDER_PAD, replace=TRUE), nrow=ORDER, ncol=ORDER_PAD)
BintPad <- matrix(sample(seq(10), ORDER*ORDER_PAD, replace=TRUE), nrow=ORDER_PAD, ncol = ORDER)
A <- matrix(rnorm(ORDER^2), nrow=ORDER, ncol=ORDER)
B <- matrix(rnorm(ORDER^2), nrow=ORDER, ncol=ORDER)
E <- matrix(rnorm(15), nrow=5)
v <- rnorm(ORDER)
# Single Precision tests
test_that("gpuMatrix Single Precision Matrix multiplication", {
has_gpu_skip()
C <- A %*% B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type = "float")
fgpuC <- fgpuA %*% fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA %*% fgpuE,
info = "error not thrown for non-conformant matrices")
fgpuC <- A %*% fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- fgpuA %*% B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix-Vector multiplication", {
has_gpu_skip()
C <- A %*% v
C2 <- v %*% B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuV <- gpuVector(v, type = "float")
fgpuC <- fgpuA %*% fgpuV
fgpuC2 <- fgpuV %*% fgpuB
expect_equal(fgpuC[,], c(C), tolerance=1e-06,
info="float matrix elements not equivalent")
expect_equal(fgpuC2[,], c(C2), tolerance=1e-06,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix Subtraction", {
has_gpu_skip()
C <- A - B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type="float")
fgpuC <- fgpuA - fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA - fgpuE)
fgpuC <- fgpuA - B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- A - fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix/Vector Subtraction", {
has_gpu_skip()
C <- A - c(B)
C2 <- c(A) - B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuVector(c(B), type="float")
fgpuC <- fgpuA - fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuA <- gpuVector(c(A), type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuC <- fgpuA - fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Scalar Matrix Subtraction", {
has_gpu_skip()
C <- A - 1
C2 <- 1 - A
fgpuA <- gpuMatrix(A, type="float")
fgpuC <- fgpuA - 1
fgpuC2 <- 1 - fgpuA
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_is(fgpuC2, "fgpuMatrix")
expect_equal(fgpuC2[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Unary Scalar Matrix Subtraction", {
has_gpu_skip()
C <- -A
fgpuA <- gpuMatrix(A, type="float")
fgpuC <- -fgpuA
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix Addition", {
has_gpu_skip()
C <- A + B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type="float")
fgpuC <- fgpuA + fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA + fgpuE)
fgpuC <- A + fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- fgpuA + B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix/Vector Addition", {
has_gpu_skip()
C <- A + c(B)
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuVector(c(B), type="float")
fgpuC <- fgpuA + fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuA <- gpuVector(c(A), type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuC <- fgpuA + fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Scalar Matrix Addition", {
has_gpu_skip()
C <- A + 1
C2 <- 1 + A
fgpuA <- gpuMatrix(A, type="float")
fgpuC <- fgpuA + 1
fgpuC2 <- 1 + fgpuA
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_is(fgpuC2, "fgpuMatrix")
expect_equal(fgpuC2[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix Element-Wise Multiplication", {
has_gpu_skip()
C <- A * B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type="float")
fgpuC <- fgpuA * fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA * fgpuE)
fgpuC <- A * fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- fgpuA * B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Scalar Matrix Multiplication", {
has_gpu_skip()
C <- A * 2
C2 <- 2 * A
dgpuA <- gpuMatrix(A, type="float")
dgpuC <- dgpuA * 2
dgpuC2 <- 2 * dgpuA
expect_is(dgpuC, "fgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_is(dgpuC2, "fgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix Element-Wise Division", {
has_gpu_skip()
C <- A / B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type="float")
fgpuC <- fgpuA / fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA / fgpuE)
fgpuC <- A / fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- fgpuA / B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Scalar Matrix Division", {
has_gpu_skip()
C <- A/2
C2 <- 2/A
dgpuA <- gpuMatrix(A, type="float")
dgpuC <- dgpuA/2
dgpuC2 <- 2/dgpuA
expect_is(dgpuC, "fgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_is(dgpuC2, "fgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Matrix Element-Wise Power", {
has_gpu_skip()
pocl_check()
C <- A ^ B
fgpuA <- gpuMatrix(A, type="float")
fgpuB <- gpuMatrix(B, type="float")
fgpuE <- gpuMatrix(E, type="float")
fgpuC <- fgpuA ^ fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(fgpuA ^ fgpuE)
fgpuC <- A ^ fgpuB
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- fgpuA ^ B
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision Scalar Matrix Power", {
has_gpu_skip()
C <- A^2
C2 <- 2^A
dgpuA <- gpuMatrix(A, type="float")
dgpuC <- dgpuA^2
dgpuC2 <- 2^dgpuA
expect_is(dgpuC, "fgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_equal(dgpuC2[,], C2, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision crossprod", {
has_gpu_skip()
X <- matrix(rnorm(10), nrow=2)
Y <- matrix(rnorm(10), nrow=2)
Z <- matrix(rnorm(10), nrow=5)
C <- crossprod(X,Y)
Cs <- crossprod(X)
fgpuX <- gpuMatrix(X, type="float")
fgpuY <- gpuMatrix(Y, type="float")
fgpuZ <- gpuMatrix(Z, type="float")
fgpuC <- crossprod(fgpuX, fgpuY)
fgpuCs <- crossprod(fgpuX)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_equal(fgpuCs[,], Cs, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(crossprod(fgpuX, fgpuZ))
fgpuC <- crossprod(fgpuX, Y)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- crossprod(X, fgpuY)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision tcrossprod", {
has_gpu_skip()
X <- matrix(rnorm(10), nrow=2)
Y <- matrix(rnorm(10), nrow=2)
Z <- matrix(rnorm(12), nrow=2)
C <- tcrossprod(X,Y)
Cs <- tcrossprod(X)
fgpuX <- gpuMatrix(X, type="float")
fgpuY <- gpuMatrix(Y, type="float")
fgpuZ <- gpuMatrix(Z, type="float")
fgpuC <- tcrossprod(fgpuX, fgpuY)
fgpuCs <- tcrossprod(fgpuX)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_equal(fgpuCs[,], Cs, tolerance=1e-07,
info="float matrix elements not equivalent")
expect_error(tcrossprod(fgpuX, fgpuZ))
fgpuC <- tcrossprod(fgpuX, Y)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
fgpuC <- tcrossprod(X, fgpuY)
expect_is(fgpuC, "fgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=1e-07,
info="float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision transpose", {
has_gpu_skip()
At <- t(A)
fgpuA <- gpuMatrix(A, type="float")
fgpuAt <- t(fgpuA)
expect_is(fgpuAt, "fgpuMatrix")
expect_equal(fgpuAt[,], At, tolerance=1e-07,
info="transposed float matrix elements not equivalent")
})
test_that("gpuMatrix Single Precision determinant", {
has_gpu_skip()
d <- det(A)
fgpuA <- gpuMatrix(A, type="float")
fgpud <- det(fgpuA)
expect_is(fgpud, "numeric")
expect_equal(fgpud, d, tolerance=1e-07,
info="float determinants not equivalent")
})
# Integer tests
test_that("gpuMatrix Integer Matrix multiplication", {
has_gpu_skip()
Cint <- Aint %*% Bint
CintPad <- AintPad %*% BintPad
igpuA <- gpuMatrix(Aint, type="integer")
igpuB <- gpuMatrix(Bint, type="integer")
igpuApad <- gpuMatrix(AintPad, type="integer")
igpuBpad <- gpuMatrix(BintPad, type="integer")
igpuC <- igpuA %*% igpuB
expect_equivalent(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- Aint %*% igpuB
expect_equivalent(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- igpuA %*% Bint
expect_equivalent(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuCpad <- igpuApad %*% igpuBpad
expect_equivalent(igpuCpad[], CintPad,
info = "padded rectangular matrix elements not equivalent")
})
test_that("gpuMatrix Integer Matrix Subtraction", {
has_gpu_skip()
Cint <- Aint - Bint
igpuA <- gpuMatrix(Aint, type="integer")
igpuB <- gpuMatrix(Bint, type="integer")
igpuC <- igpuA - igpuB
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- igpuA - Bint
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- Aint - igpuB
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Scalar Matrix Subtraction", {
has_gpu_skip()
C <- Aint - 1L
C2 <- 1L - Aint
fgpuA <- gpuMatrix(Aint, type="integer")
fgpuC <- fgpuA - 1L
fgpuC2 <- 1L - fgpuA
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
expect_is(fgpuC2, "igpuMatrix")
expect_equal(fgpuC2[,], C2,
info="intger matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Unary Scalar Matrix Subtraction", {
has_gpu_skip()
C <- -Aint
fgpuA <- gpuMatrix(Aint, type="integer")
fgpuC <- -fgpuA
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Matrix Addition", {
has_gpu_skip()
Cint <- Aint + Bint
igpuA <- gpuMatrix(Aint, type="integer")
igpuB <- gpuMatrix(Bint, type="integer")
igpuC <- igpuA + igpuB
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- Aint + igpuB
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
igpuC <- igpuA + Bint
expect_is(igpuC, "igpuMatrix")
expect_equal(igpuC[,], Cint,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Scalar Matrix Addition", {
has_gpu_skip()
C <- Aint + 1L
C2 <- 1L + Aint
fgpuA <- gpuMatrix(Aint, type="integer")
fgpuC <- fgpuA + 1L
fgpuC2 <- 1L + fgpuA
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
expect_is(fgpuC2, "igpuMatrix")
expect_equal(fgpuC2[,], C2,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Matrix Element-Wise Multiplication", {
has_gpu_skip()
C <- Aint * Bint
fgpuA <- gpuMatrix(Aint, type="integer")
fgpuB <- gpuMatrix(Bint, type="integer")
fgpuC <- fgpuA * fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- Aint * fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- fgpuA * Bint
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Scalar Matrix Multiplication", {
has_gpu_skip()
C <- Aint * 2L
C2 <- 2L * Aint
dgpuA <- gpuMatrix(Aint, type="integer")
dgpuC <- dgpuA * 2L
dgpuC2 <- 2L * dgpuA
expect_is(dgpuC, "igpuMatrix")
expect_equal(dgpuC[,], C,
info="integer matrix elements not equivalent")
expect_is(dgpuC2, "igpuMatrix")
expect_equal(dgpuC2[,], C2,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Matrix Element-Wise Division", {
has_gpu_skip()
C <- Aint / Bint
C <- apply(C, 2, as.integer)
fgpuA <- gpuMatrix(Aint, type="integer")
fgpuB <- gpuMatrix(Bint, type="integer")
fgpuC <- fgpuA / fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- Aint / fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- fgpuA / Bint
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Scalar Matrix Division", {
has_gpu_skip()
C <- Aint/2L
C2 <- 2L/Aint
C <- apply(C, 2, as.integer)
C2 <- apply(C2, 2, as.integer)
dgpuA <- gpuMatrix(Aint, type="integer")
dgpuC <- dgpuA/2L
dgpuC2 <- 2L/dgpuA
expect_is(dgpuC, "igpuMatrix")
expect_equal(dgpuC[,], C,
info="integer matrix elements not equivalent")
expect_is(dgpuC2, "igpuMatrix")
expect_equal(dgpuC2[,], C2,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Matrix Element-Wise Power", {
has_gpu_skip()
pocl_check()
Apow <- matrix(seq.int(9), ncol=3, nrow=3)
Bpow <- matrix(2, ncol = 3, nrow = 3)
C <- Apow ^ Bpow
fgpuA <- gpuMatrix(Apow, type="integer")
fgpuB <- gpuMatrix(Bpow, type="integer")
fgpuC <- fgpuA ^ fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- Apow ^ fgpuB
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
fgpuC <- fgpuA ^ Bpow
expect_is(fgpuC, "igpuMatrix")
expect_equal(fgpuC[,], C,
info="integer matrix elements not equivalent")
})
test_that("gpuMatrix Integer Precision Scalar Matrix Power", {
has_gpu_skip()
C <- Aint^2L
C2 <- 2L^Aint
C <- apply(C, 2, as.integer)
C2 <- apply(C2, 2, as.integer)
dgpuA <- gpuMatrix(Aint, type="integer")
dgpuC <- dgpuA^2L
dgpuC2 <- 2L^dgpuA
expect_is(dgpuC, "igpuMatrix")
expect_equal(dgpuC[,], C,
info="integer matrix elements not equivalent")
expect_equal(dgpuC2[,], C2,
info="integer matrix elements not equivalent")
})
# Double Precision tests
test_that("gpuMatrix Double Precision Matrix multiplication", {
has_gpu_skip()
has_double_skip()
C <- A %*% B
dgpuA <- gpuMatrix(A, type="double")
dgpuB <- gpuMatrix(B, type="double")
dgpuC <- dgpuA %*% dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- dgpuA %*% B
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- A %*% dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix-Vector multiplication", {
has_gpu_skip()
C <- A %*% v
C2 <- v %*% B
fgpuA <- gpuMatrix(A, type="double")
fgpuB <- gpuMatrix(B, type="double")
fgpuV <- gpuVector(v, type = "double")
fgpuC <- fgpuA %*% fgpuV
fgpuC2 <- fgpuV %*% fgpuB
expect_equal(fgpuC[,], c(C), tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
expect_equal(fgpuC2[,], c(C2), tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix Subtraction", {
has_gpu_skip()
has_double_skip()
C <- A - B
dgpuA <- gpuMatrix(A, type="double")
dgpuB <- gpuMatrix(B, type="double")
dgpuE <- gpuMatrix(E, type="double")
dgpuC <- dgpuA - dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(dgpuA - dgpuE)
dgpuC <- A - dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- dgpuA - B
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix/Vector Subtraction", {
has_gpu_skip()
has_double_skip()
C <- A - c(B)
C2 <- c(A) - B
fgpuA <- gpuMatrix(A, type="double")
fgpuB <- gpuVector(c(B), type="double")
fgpuC <- fgpuA - fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
fgpuA <- gpuVector(c(A), type="double")
fgpuB <- gpuMatrix(B, type="double")
fgpuC <- fgpuA - fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C2, tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix Addition", {
has_gpu_skip()
has_double_skip()
C <- A + B
dgpuA <- gpuMatrix(A, type="double")
dgpuB <- gpuMatrix(B, type="double")
dgpuE <- gpuMatrix(E, type="double")
dgpuC <- dgpuA + dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(dgpuA + dgpuE)
dgpuC <- A + dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- dgpuA + B
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix/Vector Addition", {
has_gpu_skip()
has_double_skip()
C <- A + c(B)
fgpuA <- gpuMatrix(A, type="double")
fgpuB <- gpuVector(c(B), type="double")
fgpuC <- fgpuA + fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
fgpuA <- gpuVector(c(A), type="double")
fgpuB <- gpuMatrix(B, type="double")
fgpuC <- fgpuA + fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps^0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Scalar Matrix Addition", {
has_gpu_skip()
has_double_skip()
C <- A + 1
C2 <- 1 + A
dgpuA <- gpuMatrix(A, type="double")
dgpuC <- dgpuA + 1
dgpuC2 <- 1 + dgpuA
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_is(dgpuC2, "dgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Scalar Matrix Subtraction", {
has_gpu_skip()
has_double_skip()
C <- A - 1
C2 <- 1 - A
dgpuA <- gpuMatrix(A, type="double")
dgpuC <- dgpuA - 1
dgpuC2 <- 1 - dgpuA
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_is(dgpuC2, "dgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Unary Matrix Subtraction", {
has_gpu_skip()
has_double_skip()
C <- -A
fgpuA <- gpuMatrix(A, type="double")
fgpuC <- -fgpuA
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix Element-Wise Multiplication", {
has_gpu_skip()
has_double_skip()
C <- A * B
dgpuA <- gpuMatrix(A, type="double")
dgpuB <- gpuMatrix(B, type="double")
dgpuE <- gpuMatrix(E, type="double")
dgpuC <- dgpuA * dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(dgpuA * dgpuE)
dgpuC <- A * dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- dgpuA * B
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Scalar Matrix Multiplication", {
has_gpu_skip()
has_double_skip()
C <- A * 2
C2 <- 2 * A
dgpuA <- gpuMatrix(A, type="double")
dgpuC <- dgpuA * 2
dgpuC2 <- 2 * dgpuA
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_is(dgpuC2, "dgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix Element-Wise Division", {
has_gpu_skip()
has_double_skip()
C <- A / B
dgpuA <- gpuMatrix(A, type="double")
dgpuB <- gpuMatrix(B, type="double")
dgpuE <- gpuMatrix(E, type="double")
dgpuC <- dgpuA / dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(dgpuA * dgpuE)
dgpuC <- A / dgpuB
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
dgpuC <- dgpuA / B
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Scalar Matrix Division", {
has_gpu_skip()
has_double_skip()
C <- A/2
C2 <- 2/A
dgpuA <- gpuMatrix(A, type="double")
dgpuC <- dgpuA/2
dgpuC2 <- 2/dgpuA
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_is(dgpuC2, "dgpuMatrix")
expect_equal(dgpuC2[,], C2, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Matrix Element-Wise Power", {
has_gpu_skip()
has_double_skip()
pocl_check()
C <- A ^ B
fgpuA <- gpuMatrix(A, type="double")
fgpuB <- gpuMatrix(B, type="double")
fgpuE <- gpuMatrix(E, type="double")
fgpuC <- fgpuA ^ fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(fgpuA ^ fgpuE)
fgpuC <- A ^ fgpuB
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
fgpuC <- fgpuA ^ B
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision Scalar Matrix Power", {
has_gpu_skip()
has_double_skip()
C <- A^2
dgpuA <- gpuMatrix(A, type="double")
dgpuC <- dgpuA^2
expect_is(dgpuC, "dgpuMatrix")
expect_equal(dgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision crossprod", {
has_gpu_skip()
has_double_skip()
X <- matrix(rnorm(10), nrow=2)
Y <- matrix(rnorm(10), nrow=2)
Z <- matrix(rnorm(10), nrow=5)
C <- crossprod(X,Y)
Cs <- crossprod(X)
fgpuX <- gpuMatrix(X, type="double")
fgpuY <- gpuMatrix(Y, type="double")
fgpuZ <- gpuMatrix(Z, type="double")
fgpuC <- crossprod(fgpuX, fgpuY)
fgpuCs <- crossprod(fgpuX)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_equal(fgpuCs[,], Cs, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(crossprod(fgpuX, fgpuZ))
fgpuC <- crossprod(fgpuX, Y)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
fgpuC <- crossprod(X, fgpuY)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision tcrossprod", {
has_gpu_skip()
has_double_skip()
X <- matrix(rnorm(10), nrow=2)
Y <- matrix(rnorm(10), nrow=2)
Z <- matrix(rnorm(12), nrow=2)
C <- tcrossprod(X,Y)
Cs <- tcrossprod(X)
fgpuX <- gpuMatrix(X, type="double")
fgpuY <- gpuMatrix(Y, type="double")
fgpuZ <- gpuMatrix(Z, type="double")
fgpuC <- tcrossprod(fgpuX, fgpuY)
fgpuCs <- tcrossprod(fgpuX)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_equal(fgpuCs[,], Cs, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
expect_error(tcrossprod(fgpuX, fgpuZ))
fgpuC <- tcrossprod(fgpuX, Y)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
fgpuC <- tcrossprod(X, fgpuY)
expect_is(fgpuC, "dgpuMatrix")
expect_equal(fgpuC[,], C, tolerance=.Machine$double.eps ^ 0.5,
info="double matrix elements not equivalent")
})
test_that("gpuMatrix Double Precision transpose", {
has_gpu_skip()
has_double_skip()
At <- t(A)
fgpuA <- gpuMatrix(A, type="double")
fgpuAt <- t(fgpuA)
expect_is(fgpuAt, "dgpuMatrix")
expect_equal(fgpuAt[,], At, tolerance=.Machine$double.eps^0.5,
info="transposed double matrix elements not equivalent")
})
test_that("gpuMatrix Diagonal access", {
has_gpu_skip()
fgpuA <- gpuMatrix(A, type="float")
D <- diag(A)
gpuD <- diag(fgpuA)
expect_is(gpuD, "fgpuVector")
expect_equal(gpuD[,], D, tolerance=1e-07,
info="float matrix diagonal elements not equivalent")
vec <- rnorm(ORDER)
diag(fgpuA) <- gpuVector(vec, type = "float")
diag(A) <- vec
expect_equal(fgpuA[,], A, tolerance=1e-07,
info="set float matrix diagonal elements not equivalent")
has_double_skip()
fgpuA <- gpuMatrix(A, type="double")
D <- diag(A)
gpuD <- diag(fgpuA)
expect_is(gpuD, "dgpuVector")
expect_equal(gpuD[,], D, tolerance=.Machine$double.eps^0.5,
info="double matrix diagonal elements not equivalent")
vec <- rnorm(ORDER)
diag(fgpuA) <- gpuVector(vec, type = "double")
diag(A) <- vec
expect_equal(fgpuA[,], A, tolerance=.Machine$double.eps^0.5,
info="set double matrix diagonal elements not equivalent")
})
test_that("gpuMatrix Double Precision determinant", {
has_gpu_skip()
has_double_skip()
d <- det(A)
fgpuA <- gpuMatrix(A, type="double")
fgpud <- det(fgpuA)
expect_is(fgpud, "numeric")
expect_equal(fgpud, d, tolerance=.Machine$double.eps^0.5,
info="double determinants not equivalent")
})
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