Nothing
##
## PURPOSE: Computation of the predictive marginal (univariate) densities
## * default method
##
## AUTHOR: Arnost Komarek (LaTeX: Arno\v{s}t Kom\'arek)
## arnost.komarek[AT]mff.cuni.cz
##
## CREATED: 03/12/2007
## 15/03/2017 .C call uses registered routines
##
## FUNCTIONS: NMixPredDensMarg.default (03/12/2007)
##
## ======================================================================
## *************************************************************
## NMixPredDensMarg.default
## *************************************************************
##
## Z ~ sum w[j] N(mu[j], (Li[j] %*% Li[j])^{-1})
## It computes marginal densities of X[d] = scale$shift[d] + scale$scale[d] * Z[d]
##
NMixPredDensMarg.default <- function(x, scale, K, w, mu, Li, Krandom=TRUE, ...)
{
thispackage <- "mixAK"
## Dimension of the normal mixture
if (is.numeric(x)) x <- list(x1=x)
if (!is.list(x)) stop("x must be a list")
p <- length(x)
if (p < 1) stop("length of x must be 1 or more")
LTp <- p * (p + 1)/2
if (is.null(names(x))) names(x) <- paste("x", (1:p), sep="")
## scale
if (missing(scale)) scale <- list(shift=rep(0, p), scale=rep(1, p))
if (!is.list(scale)) stop("scale must be a list")
if (length(scale) != 2) stop("scale must have 2 components")
inscale <- names(scale)
iscale.shift <- match("shift", inscale, nomatch=NA)
iscale.scale <- match("scale", inscale, nomatch=NA)
if (is.na(iscale.shift)) stop("scale$shift is missing")
if (length(scale$shift) == 1) scale$shift <- rep(scale$shift, p)
if (length(scale$shift) != p) stop(paste("scale$shift must be a vector of length ", p, sep=""))
if (is.na(iscale.scale)) stop("scale$scale is missing")
if (length(scale$scale) == 1) scale$scale <- rep(scale$scale, p)
if (length(scale$scale) != p) stop(paste("scale$scale must be a vector of length ", p, sep=""))
if (any(scale$scale <= 0)) stop("all elements of scale$scale must be positive")
## Check chains
Kmax <- max(K)
if (any(K <= 0)) stop("all K's must be positive")
if (Krandom){
M <- length(K)
sumK <- sum(K)
}else{
K <- K[1]
M <- length(w)/K
sumK <- K * M
}
if (length(w) != sumK) stop("incorrect w supplied")
if (length(mu) != p*sumK) stop("incorrect mu supplied")
if (length(Li) != LTp*sumK) stop("incorrect Li supplied")
## Lengths of grids in each margin
n <- sapply(x, length)
if (any(n <= 0)) stop("incorrect x supplied")
## Total length of the grid
lgrid <- sum(n)
clgrids <- c(0, cumsum(n))
## Adjust grids with respect to scaling
grid <- list()
for (d in 1:p) grid[[d]] <- (x[[d]] - scale$shift[d])/scale$scale[d]
RES <- .C(C_NMix_PredDensMarg,
dens=double(lgrid),
densK=double(lgrid*Kmax),
freqK=integer(Kmax),
propK=double(Kmax),
dwork=double(LTp),
err=integer(1),
y=as.double(unlist(grid)),
p=as.integer(p),
n=as.integer(n),
chK=as.integer(K),
chw=as.double(w),
chmu=as.double(mu),
chLi=as.double(Li),
M=as.integer(M),
Kmax=as.integer(Kmax),
Krandom=as.integer(Krandom),
PACKAGE=thispackage)
if (RES$err) stop("Something went wrong.")
RET <- list(x=x, freqK=RES$freqK, propK=RES$propK, MCMC.length=M)
if (p == 1){
RET$dens[[1]] <- RES$dens / scale$scale[1]
RET$densK[[1]] <- list()
for (j in 1:Kmax){
RET$densK[[1]][[j]] <- RES$densK[((j-1)*lgrid+1):(j*lgrid)] / scale$scale[1]
}
names(RET$dens) <- names(RET$densK) <- "1"
}else{
RET$dens <- RET$densK <- list()
for (m0 in 1:p){
RET$dens[[m0]] <- RES$dens[(clgrids[m0]+1):clgrids[m0+1]] / scale$scale[m0]
RET$densK[[m0]] <- list()
for (j in 1:Kmax){
RET$densK[[m0]][[j]] <- RES$densK[((j-1)*lgrid + clgrids[m0] + 1):((j-1)*lgrid + clgrids[m0+1])] / scale$scale[d]
}
}
names(RET$dens) <- names(RET$densK) <- paste(1:p)
}
class(RET) <- "NMixPredDensMarg"
return(RET)
}
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.