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R/shannon.R
In msap: Statistical analysis for Methylation-sensitive Amplification Polymorphism data
shannon <-function(x){
#Calculate Shannon's Diversity Index given a list of binomial alleles
t <- table(x)
if (length(t)<2) return(NaN)
P=t[1]/sum(t)
Q=t[2]/sum(t)
S=-(P*log(P)+Q*log(Q))
return(S)
}
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msap documentation built on May 2, 2019, 9:58 a.m.
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shannon <-function(x){
#Calculate Shannon's Diversity Index given a list of binomial alleles
t <- table(x)
if (length(t)<2) return(NaN)
P=t[1]/sum(t)
Q=t[2]/sum(t)
S=-(P*log(P)+Q*log(Q))
return(S)
}
Try the msap package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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