tests/ex.R

## Marron Wand examples are defined as norMix() calls in  ../R/zMarrWand-dens.R
library("nor1mix")

ii <- c(32, 39, 40, 40, 48, 48, 49, 56, 57, 58, 65)
pp <- 0.486 + ii / 100000 # very constrained set

e <- norMix(mu = c(-0.825,0.275), sigma = sqrt(0.773), w = c(1, 3)/4)

qnorMix(pp, e, trace = TRUE)
## failed for version <= 1.0-5

q.pp <- -c(7.78151762922529, 7.60511100150266, 7.57991031275271, 7.57991031275271,
           7.37830712226037, 7.37830712226037, 7.35310701314534, 7.17670804948685,
           7.15150845450588, 7.12630892371882, 6.94991400429199) / 1000

for (m in eval(formals(qnorMix)$method)) {
    cat("method ", m,":")
    stopifnot(all.equal(q.pp, qnorMix(pp, e, method = m, tol = 1e-14),
			tol = 1e-13),# 1.022e-14 (32-bit)
              abs(qnorMix(rep(1/2, 8), MW.nm10, method = m)) < 1e-14
              )
    cat("\n")
}

### a "nasty" example (for the newton steps):
ip <- c(0, 1e-11, 3.33e-09, 7.705488e-05, 0.0001670041, 0.00125378934,
        0.00141169953, 0.00357409109, 0.00644073795, 0.00853238955, 0.01361442421,
        0.01672761627, 0.02067755849, 0.02124092026, 0.03327537558, 0.03527226553,
        0.05365983941, 0.05482289811, 0.05669602608, 0.05982167629)
qv <- qnorMix(1-ip, MW.nm12, trace=1)
## now ok

### --- lower.tail=FALSE   did not work correctly  at some point
qv. <- qnorMix(ip, MW.nm12, lower.tail=FALSE, trace=1)#2, maxiter=50)
stopifnot(all.equal(qv, qv., tol = 1e-5))

## qnorMix(*, log.p=TRUE)  currently warns about  missing Newton step implementation
qnorMixLog <- function(p, obj, lower.tail = TRUE, ...)
    suppressWarnings(qnorMix(p, obj, lower.tail=lower.tail, log.p=TRUE, ...))
##
n2 <- 8
set.seed(11)
for(i in 1:50) {
cat(i, "", if(i %% 20 == 0)"\n")
u0 <- c(0,sort(runif(n2)),1)
q0 <- qnorMix(u0,   MW.nm2,                   trace=0, tol=4e-16)
qL <- qnorMix(1-u0, MW.nm2, lower.tail=FALSE, trace=0, tol=4e-16)
stopifnot(all.equal(pnorMix(q0, MW.nm2), u0, tol=1e-15),
          all.equal(q0, qL, tol=1e-14))
i. <- 2:(n2+1); u0. <- u0[i.]
## --- log.p= TRUE  [no Newton steps]
q0. <- qnorMixLog(log  ( u0.), MW.nm2,                   tol=4e-16)
qL. <- qnorMixLog(log1p(-u0.), MW.nm2, lower.tail=FALSE, tol=4e-16)
stopifnot(all.equal(pnorMix(q0, MW.nm2), u0, tol=1e-15),
	  all.equal(q0, qL,   tol=1e-14),
	  all.equal(q0., qL., tol=1e-10),
	  all.equal(q0[i.], q0., tol = 6e-6)# no Newton => less accuracy
	  )
}; cat("\n")

## A  'trace = 3'  example --- had a bug w/o noticing (in 1.1-1, maybe earlier):
q3.1 <- qnorMix(c(0.1, 0.5, 0.99), MW.nm12, lower.tail=FALSE, trace=3, method="each")
q3.2 <- qnorMix(c(0.1, 0.5, 0.99), MW.nm12, lower.tail=FALSE, trace=3, method="root2")
q3.3 <- qnorMix(c(0.1, 0.5, 0.99), MW.nm12, lower.tail=FALSE, trace=3, method="interpQ")
stopifnot(all.equal(q3.1, q3.2, tol = 1e-5),
	  all.equal(q3.2, q3.3, tol = 1e-5),
	  all.equal(q3.3, q3.1, tol = 1e-5))

cat('Time elapsed: ', proc.time(),'\n') # for ``statistical reasons''

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nor1mix documentation built on Aug. 30, 2017, 5:09 p.m.