R/photobiologyInOut.r

#' @section Data acquisition: The support for Ocean Insight, formerly Ocean
#'   Optics, spectrometers in package 'photobiologyInOut' is limited to the
#'   import of data acquired with Ocean Optics' software as is. In contrast,
#'   package 'ooacquire', part of these same suite, makes it possible to
#'   control, modify settings and acquire spectral data from Ocean Optics
#'   spectrometers directly from within R. 'ooacquire' also supports the
#'   conversion of raw-counts data into physical quantities.
#'   
#' @section Warning!: Most of the file formats supported are not standardized,
#'   and are a moving target because of changes in instrument firmware and
#'   support software. In addition the output format, especially with models,
#'   can depend on settings that users can alter. So do check that import is
#'   working as expected, and if not, please please raise an issue and upload
#'   one example of an incorrectly decoded file.
#' 
#' @note From version 0.4.4 the time zone (tz) used for decoding dates
#'   and times in files imported defaults to "UTC". In most cases you will need
#'   to pass the tz (or the locale) where the file was created as an argument to
#'   the functions!
#'   
#' @references 
#' Aphalo, Pedro J. (2015) The r4photobiology suite. UV4Plants Bulletin, 2015:1,
#' 21-29. \doi{10.19232/uv4pb.2015.1.14}.
#'
#' @import photobiology
#' 
"_PACKAGE"

Try the photobiologyInOut package in your browser

Any scripts or data that you put into this service are public.

photobiologyInOut documentation built on July 26, 2023, 5:15 p.m.