NEWS.md

In rMEA: Synchrony in Motion Energy Analysis (MEA) Time-Series

title: "rMEA NEWS" pagetitle: rMEA

v1.2.2

[2022/02/09]

• shuffle_segments() was unreliable. It was disabled until someone fixes it.

v1.2.1

[2021/03/31] minor bugfixes

• lagSec=0 and lagSec=1 are now supported
• documentation update

v1.2.0

[2020/07/29] Yearly update to CRAN

• the package is now compatible with R version 4.0
• New function: shuffle_segment(), offering within subject shuffling. This function is included for replication of older studies. shuffle() is still more conservative, and suggested approach to pseudosynchrony.
• New function CCFartefacts() to identify sequences with extremely high correlation, which may require inspection of the videos.
• New function: MEAreplace() allows to automatically delete (set to NA) or replace windows of MEA data, based on a data frame created by hand, or with functions like CCFartefacts().

Minor changes

• various improvements in the documentation
• all function now dynamically use ccfResNames.
• writeMEA now reports all ccfResNames.
• ccfRes now stores as well the 'bestLag' values, and the start and end of the synchronization windows (thanks to anonymous reviewer 2 for the suggestion).
• MEAheatmap received a new parameter 'mirror' that offers finer control on the color scale.
• shuffle() now allows to specify size = "max", to use all possible combinations.
• automatic detection of 'na.rm' arguments in MEAscale FUNs was buggy. So now there is a new argument 'removeNA' which applies na.omit on the data before submitting it to the scaling FUN.
• improved the MEAmap use of dots (...), which are now recycled and iterating correctly (when not a function)

v1.1.0.9002

• fixed a bug preventing heatmaps to be plotted with missing data
• improved MEAdistplot() to allow grouping by "id", "session", and "group"

v1.1.0.9001

• improved MEAdistplot() to support single session groups
• fixed a bug in MEAdistplot for plotting single groups

v1.1.0

[2019/03/22] Yearly update to CRAN

• included LICENSE file
• improved fisher's transform performance
• updated rangeRescale function
• fixed minor bug in heatmap scaling
• added heatmap "rescale" parameter to highlight small trends in data
• improved axis label in various plots
• plot.MEA can now use "duration" instead of "to"
• various minor bug fixes
• added plot.MEAlist

v1.0.0.9012

• Implemented "[.MEAlist" method to extract from MEAlist while retaining metadata.
• included a function to extract CCF values (getCCF())
• shuffle now retains the names of the original signals in its uid

v1.0.0.9011

• fixed a bug in plot.MEA when interpolation results in NA vals
• updated documentation in readMEA
• all functions accepting MEAlist objects now should accept a list instead and try to parse as MEAlist internally
• new getter functions for MEA and MEAlist attributes

v1.0.0.9010

• more informative error messages
• fixed smaller bugs

v1.0.0 Initial release

• Everything should work

rMEA documentation built on March 18, 2022, 5:41 p.m.