gb_build2: Callr version of gb_build()

Description Usage Arguments Value See Also

View source: R/callr-tools.R

Description

Runs gb_build in callr. This allows the user to kill the process. Additionally, the process will print spinning dots to indicate it is still active.

Usage

1
gb_build2(dpth, seq_files, max_length, min_length)

Arguments

dpth

Download path (where seq_files are stored)

seq_files

.seq.tar seq file names

max_length

Maximum sequence length.

min_length

Minimum sequence length.

Value

Logical

See Also

Other private: add_rcrd_log, cat_line, char, check_connection, cleanup, connected, connection_get, custom_download2, custom_download, db_sqlngths_get, db_sqlngths_log, dir_size, dwnld_path_get, dwnld_rcrd_log, entrez_fasta_get, entrez_gb_get, extract_accession, extract_by_patterns, extract_clean_sequence, extract_definition, extract_features, extract_inforecpart, extract_keywords, extract_locus, extract_organism, extract_seqrecpart, extract_sequence, extract_version, file_download, filename_log, flatfile_read, gb_build, gb_df_create, gb_df_generate, gb_sql_add, gb_sql_query, gbrelease_check, gbrelease_get, gbrelease_log, has_data, identify_downloadable_files, last_add_get, last_dwnld_get, last_entry_get, latest_genbank_release_notes, latest_genbank_release, message_missing, mock_def, mock_gb_df_generate, mock_org, mock_rec, mock_seq, predict_datasizes, print.status, quiet_connect, readme_log, restez_path_check, restez_rl, seshinfo_log, setup, slctn_get, slctn_log, sql_path_get, status_class, stat, testdatadir_get


restez documentation built on Nov. 27, 2018, 1:05 a.m.