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#2-d plot with high regret colored outputs:
#object is a dataset, with output dimensions thresholded
#xdim and ydim are the column numbers referring to the x and y axis
#outdim is colnum for output dimension
#lowcol gives the color to fill in points below threshold
#hicol gives the color to fill in for points above threshold
#... is in case of passing on xlim and ylim
colptplot <- function(object,xdim,ydim,outdim=ncol(object),lowcol="transparent",
hicol="black",xname=colnames(object)[xdim],yname=colnames(object)[ydim],xlims=NULL,ylims=NULL,...){
x <- object[,xdim]
y <- object[,ydim]
collogi <- object[,outdim]==1 #logical vector of high/low
colvect <- rep(lowcol, nrow(object)) #vector of all lowcolors
colvect[collogi] <- hicol #replace high values with hicol
plot(x,y,col=hicol,pch=(collogi*15+1), xlab=xname, ylab=yname,xlim=xlims,ylim=ylims,...)
#This format has all points the color of high color, but only those that are
#equal to 1 are actually filled in (controlled with pch - 1 or 16
}
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