Nothing
## ----message=FALSE, warning=FALSE, message=FALSE------------------------------
# first load data and packages
library(sf)
library(spNetwork)
library(tmap)
library(dbscan)
data(mtl_network)
data(bike_accidents)
# then plotting the data
tm_shape(mtl_network) +
tm_lines("black") +
tm_shape(bike_accidents) +
tm_dots("red", size = 0.2)
## ----include=FALSE------------------------------------------------------------
load(system.file("extdata", "results_vignette_network_build.rda",
package = "spNetwork", mustWork = TRUE))
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# # calculating the density values
# densities <- nkde(mtl_network,
# events = bike_accidents,
# w = rep(1,nrow(bike_accidents)),
# samples = bike_accidents,
# kernel_name = "quartic",
# bw = 300, div= "bw",
# method = "discontinuous", digits = 2, tol = 0.5,
# grid_shape = c(1,1), max_depth = 8,
# agg = 5,
# sparse = TRUE,
# verbose = FALSE)
#
# bike_accidents$density <- densities * 1000
## ----message=FALSE, warning=FALSE---------------------------------------------
# mapping the density values
tm_shape(mtl_network) +
tm_lines(col = "black") +
tm_shape(bike_accidents) +
tm_dots(col = "density", style = "kmeans",
n = 6, size = 0.1, palette = "-RdYlBu")+
tm_layout(legend.outside = TRUE)
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# bike_accidents$weight <- 1
# agg_points <- aggregate_points(bike_accidents, maxdist = 5)
#
# agg_points$OID <- 1:nrow(agg_points)
# mtl_network$LineID <- 1:nrow(mtl_network)
#
# snapped_accidents <- snapPointsToLines2(agg_points,
# mtl_network,
# "LineID")
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# new_lines <- split_lines_at_vertex(mtl_network,
# snapped_accidents,
# snapped_accidents$nearest_line_id,
# mindist = 0.1)
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# new_lines$OID <- 1:nrow(new_lines)
# new_lines$length <- as.numeric(st_length(new_lines))
#
# graph_result <- build_graph(new_lines, 2, "length", attrs = TRUE)
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# btws <- igraph::betweenness(graph_result$graph, directed = FALSE,
# normalized = TRUE)
# vertices <- graph_result$spvertices
# vertices$btws <- btws
## ----message=FALSE, warning=FALSE---------------------------------------------
# mapping the betweenness
tm_shape(vertices) +
tm_dots(col = "btws", style = "kmeans",
n = 6, size = 0.1, palette = "-RdYlBu")+
tm_layout(legend.outside = TRUE)
## ----message=FALSE, warning=FALSE, eval = FALSE-------------------------------
# # first: nn merging between snapped points and nodes
# xy1 <- st_coordinates(snapped_accidents)
# xy2 <- st_coordinates(vertices)
# corr_nodes <- dbscan::kNN(x = xy2, query = xy1, k=1)$id
#
# snapped_accidents$btws <- vertices$btws[corr_nodes]
#
# # second: nn merging between original points and snapped points
# xy1 <- st_coordinates(bike_accidents)
# xy2 <- st_coordinates(snapped_accidents)
#
# corr_nodes <- dbscan::kNN(x = xy2, query = xy1, k=1)$id
# bike_accidents$btws <- snapped_accidents$btws[corr_nodes]
## ----message=FALSE, warning=FALSE---------------------------------------------
# mapping the results
tm_shape(bike_accidents) +
tm_dots(col = "btws", style = "kmeans",
n = 6, size = 0.1, palette = "-RdYlBu")+
tm_layout(legend.outside = TRUE)
tm_shape(bike_accidents) +
tm_dots(col = "density", style = "kmeans",
n = 6, size = 0.1, palette = "-RdYlBu")+
tm_layout(legend.outside = TRUE)
## ----message=FALSE, warning=FALSE---------------------------------------------
cor.test(bike_accidents$density, bike_accidents$btws)
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