bias_ss3: Perform a single bias adjustment run

Description Usage Arguments Value Author(s) References See Also

View source: R/bias_ss3.r

Description

This function is run within run_bias_ss3 and for a single run it:

Usage

1
bias_ss3(iter, dir)

Arguments

iter

Replicate number. Used to identify this iteration if there are multiple adjustment runs.

dir

Passes dir from the function run_bias_ss3 to bias_ss3. In run_bias_ss3 this is run within an sapply function for each of the bias adjustment runs.

Value

A plain text file containing the bias adjustment variables is created at dir/AdjustBias.DAT. A PDF figure is created in dir/biasramp-N.pdf, where N represents the iteration number.

Author(s)

Carey McGilliard

References

Methot, R. D. and Taylor, I. G. (2011). Adjusting for bias due to variability of estimated recruitments in fishery assessment models. Can. J. Fish. Aquat. Sci., 68(10):1744-1760.

See Also

run_bias_ss3, run_ss3sim, ss3sim_base


ss3sim documentation built on May 20, 2017, 4:28 a.m.

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