tnrs: Phylotastic Taxonomic Name Resolution Service.

Description Usage Arguments Details Value Author(s) See Also

Description

Methods of tnrs for taxlist objects.

Usage

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## S4 method for signature 'character'
tnrs(query, ...)

## S4 method for signature 'taxlist'
tnrs(query, min_score=0.8, source="iPlant_TNRS", ...)

Arguments

query

Either a character vector or a taxlist object with names to search.

min_score

Minimum value of score for considering accepted names as suggested by the output.

source

Source database.

...

Further arguments passed to tnrs.

Details

This function checks for matching of taxon names in taxlist objects with the Taxonomic Name Resolution Service (TNRS). Misspelled names as well as author names will be replaced in the the new object and new accepted names will be inserted.

A method for character vectors is defined for the original function.

Value

A data frame or an object of class taxlist.

Author(s)

Miguel Alvarez ([email protected]).

See Also

tnrs.


taxlist documentation built on July 2, 2018, 1:03 a.m.