Nothing
context("create Cluster Plots")
kmobj = structure(list(centers=matrix(c(1,1,1,1,1,
2,2,2,2,2,
3,3,3,3,3),nrow=5,
dimnames = list(c("1","2","3","4","5"),c("f1","f2","f3")))),
class = c("toakmeans", "kmeans"))
test_that("Cluster plot functions throw errors", {
expect_error(createCentroidPlot(km=structure(list(centers=matrix(c(1), nrow=1, byrow = TRUE)),
class = c("toakmeans", "kmeans")),
format="no-such-vis-format"),
"'arg' should be one of \"line\", \"bar\", \"heatmap\", \"bar_dodge\"")
expect_error(createCentroidPlot(),
"Kmeans or canopy object must be specified.")
expect_error(createCentroidPlot(km=1),
"Kmeans or canopy object must be specified.")
expect_error(createCentroidPlot(km=structure(list(), class = c("NOTtoakmeans", "NOTkmeans"))),
"Kmeans or canopy object must be specified.")
expect_error(createCentroidPlot(km=structure(list(), class = c("toakmeans", "kmeans"))),
"Kmeans object is missing cluster centers.")
expect_error(createCentroidPlot(km=kmobj, clusters = NULL),
"All clusters must be defined in kmeans object: .")
expect_error(createCentroidPlot(km=kmobj, clusters = c()),
"All clusters must be defined in kmeans object: .")
expect_error(createCentroidPlot(km=kmobj, clusters = c(1,2,6,12)),
"All clusters must be defined in kmeans object: 6,12.")
expect_error(createCentroidPlot(km=kmobj, dims = NULL),
"All dimensions must be defined in kmeans object: .")
expect_error(createCentroidPlot(km=kmobj, dims = c()),
"All dimensions must be defined in kmeans object: .")
expect_error(createCentroidPlot(km=kmobj, dims = c("f1","f6","f12")),
"All dimensions must be defined in kmeans object: f6,f12.")
expect_error(createClusterPlot(),
"Kmeans object must be specified.")
expect_error(createClusterPlot(km=structure(list(), class = c("toakmeans", "kmeans"))),
"Kmeans object is missing cluster aggregates.")
expect_error(createClusterPairsPlot(),
"Kmeans object must be specified.")
expect_error(createClusterPairsPlot(km=structure(list(), class = c("toakmeans"))),
"Kmeans object is missing sample data.")
expect_error(createClusterPairsPlot(km=structure(list(data=data.frame(col1=c(1,2,3), col2=c('a','b','c'))),
class = c("toakmeans"),
.Names = c("data")),
include=c('nosuch1','nosuch2')),
"No columns left to plot.")
expect_error(createClusterPairsPlot(km=structure(list(data=data.frame(col1=c(1,2,3), col2=c('a','b','c'))),
class = c("toakmeans"),
.Names = c("data")),
except=c('col1','col2')),
"No columns left to plot.")
expect_error(createSilhouetteProfile(),
"Kmeans object must be specified.")
expect_error(createSilhouetteProfile(km=structure(list(), class = c("toakmeans", "kmeans"))),
"Kmeans object is missing silhouette data.")
expect_error(createSilhouetteProfile(km=structure(list(sil=list()), class = c("toakmeans", "kmeans"))),
"Kmeans object is missing silhouette data.")
})
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