inst/tests/ggplot.R

if (require(ggplot2)) {
  airquality$Heat <- cut(airquality$Temp, 3, labels=c("Cool","Mild","Hot"))
  airquality$Mon <- factor(month.abb[airquality$Month], levels=month.abb[5:9])
  fit <- lm(Ozone ~ Wind + Heat + Solar.R + Mon, data=airquality)
  visreg(fit, "Wind", gg=TRUE)
  visreg(fit, "Wind", gg=TRUE) + geom_smooth(col='red', method='loess')
  visreg(fit, "Wind", gg=TRUE, line.par=list(col='green'))
  visreg(fit, "Heat", gg=TRUE)
  visreg(fit, "Heat", gg=TRUE, line.par=list(col="green"))

  fit <- lm(Ozone ~ Wind * Heat + Solar.R + Mon, data=airquality)
  visreg(fit, "Heat", by="Wind", gg=TRUE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, strip.names=FALSE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, strip.names=LETTERS[1:3])
  visreg(fit, "Heat", by="Wind", gg=TRUE, type="contrast")
  visreg(fit, "Heat", by="Wind", gg=TRUE, partial=FALSE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, band=FALSE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, partial=FALSE, band=FALSE)

  fit <- lm(Ozone ~ Wind * Heat + Solar.R + Mon, data=airquality)
  visreg(fit, "Wind", by="Heat", gg=TRUE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, strip.names=TRUE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, strip.names=LETTERS[1:3])
  visreg(fit, "Wind", by="Heat", gg=TRUE, type="contrast")
  visreg(fit, "Wind", by="Heat", gg=TRUE, partial=FALSE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, band=FALSE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, partial=FALSE, band=FALSE)

  # Overlays
  visreg(fit, "Wind", by="Heat", gg=TRUE, overlay=TRUE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, type="contrast", overlay=TRUE)
  visreg(fit, "Wind", by="Heat", gg=TRUE, type="contrast", overlay=TRUE, partial=FALSE, band=FALSE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, overlay=TRUE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, overlay=TRUE, breaks=c(0,10,20))
  visreg(fit, "Heat", by="Wind", gg=TRUE, overlay=TRUE, partial=FALSE, band=FALSE)
  visreg(fit, "Wind", by="Solar.R", gg=TRUE, overlay=TRUE, breaks=9)
  visreg(fit, "Wind", by="Heat", gg=TRUE, rug=2, overlay=TRUE)
  visreg(fit, "Heat", by="Wind", gg=TRUE, rug=2, overlay=TRUE)
  
  # Breaks
  visreg(fit, "Heat", by="Wind", gg=TRUE, breaks=4)
  visreg(fit, "Heat", by="Mon", gg=TRUE)
  visreg(fit, "Wind", by="Solar.R", gg=TRUE)
  visreg(fit, "Wind", by="Solar.R", gg=TRUE, breaks=4)

  # Aesthetic options
  visreg(fit, "Wind", by="Heat", gg=TRUE, xlab="XXX", ylab="YYY")
  visreg(fit, "Wind", by="Heat", gg=TRUE, line=list(col="blue", size=5), points=list(col="red", size=3), fill=list(fill="yellow", col="green"))
  visreg(fit, "Heat", by="Wind", gg=TRUE, xlab="XXX", ylab="YYY")
  visreg(fit, "Heat", by="Wind", gg=TRUE, line=list(col="blue", size=5), points=list(col="red", size=3), fill=list(fill="yellow", col="green"))

  # A transformation
  fit <- lm(log(Ozone) ~ Wind * Heat + Solar.R + Mon, data=airquality)
  visreg(fit,"Wind", by='Solar.R', gg=TRUE, trans=exp, overlay=TRUE)
  
  # Numeric variables with few unique values
  airquality$Hotness <- as.numeric(cut(airquality$Temp,2,labels=c("Cold","Hot")))
  fit <- lm(Ozone ~ Solar.R + Wind*Hotness, data=airquality)
  visreg(fit, "Wind", by="Hotness", gg=TRUE)
  visreg(fit, "Wind", by="Hotness", gg=TRUE, overlay=TRUE)
}

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visreg documentation built on July 1, 2020, 10:24 p.m.